Hb_000080_200

Information

Type -
Description -
Location Contig80: 176914-179127
Sequence    

Annotation

kegg
ID pop:POPTR_0007s01580g
description POPTRDRAFT_1081949; hypothetical protein
nr
ID XP_012065221.1
description PREDICTED: probable peroxidase 61 [Jatropha curcas]
swissprot
ID Q9FLV5
description Probable peroxidase 61 OS=Arabidopsis thaliana GN=PER61 PE=3 SV=1
trembl
ID A0A067LH45
description Peroxidase OS=Jatropha curcas GN=JCGZ_20915 PE=3 SV=1
Gene Ontology
ID GO:0005576
description probable peroxidase 61

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58751: 177286-178917
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000080_200 0.0 - - PREDICTED: probable peroxidase 61 [Jatropha curcas]
2 Hb_001638_320 0.2044448568 - - hypothetical protein POPTR_0014s10150g [Populus trichocarpa]
3 Hb_001163_040 0.236925562 - - Cytochrome-c oxidases,electron carriers [Theobroma cacao]
4 Hb_033376_010 0.2384462965 - - hypothetical protein POPTR_0008s02960g [Populus trichocarpa]
5 Hb_000023_290 0.2414342809 - - steroid binding protein, putative [Ricinus communis]
6 Hb_005045_070 0.2452143433 - - PREDICTED: deSI-like protein At4g17486 [Jatropha curcas]
7 Hb_000162_220 0.2458242689 - - nodulin family protein [Populus trichocarpa]
8 Hb_000130_100 0.2466472599 - - hypothetical protein CICLE_v10022662mg [Citrus clementina]
9 Hb_000407_070 0.2485620314 - - PREDICTED: probable tyrosine-protein phosphatase At1g05000 isoform X1 [Jatropha curcas]
10 Hb_002609_160 0.2531045455 - - PREDICTED: GDP-mannose transporter GONST2 [Jatropha curcas]
11 Hb_001252_210 0.25331191 - - PREDICTED: glycine cleavage system H protein 2, mitochondrial [Jatropha curcas]
12 Hb_000072_210 0.2551232915 - - PREDICTED: pentatricopeptide repeat-containing protein At5g38730 [Jatropha curcas]
13 Hb_002344_130 0.2559585392 - - PREDICTED: copper transporter 5 [Jatropha curcas]
14 Hb_000390_140 0.2564890217 - - PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Jatropha curcas]
15 Hb_001922_180 0.2576024498 - - hevamine-A precursor, putative [Ricinus communis]
16 Hb_001882_070 0.2583308217 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105634911 [Jatropha curcas]
17 Hb_007894_230 0.2584119018 - - 30S ribosomal protein S14, putative [Ricinus communis]
18 Hb_003663_070 0.260402894 - - -
19 Hb_004883_030 0.260870652 - - PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2-like [Jatropha curcas]
20 Hb_029904_040 0.2614996342 - - putative aspartate aminotransferase protein, partial [Elaeis guineensis]

Gene co-expression network

sample Hb_000080_200 Hb_000080_200 Hb_001638_320 Hb_001638_320 Hb_000080_200--Hb_001638_320 Hb_001163_040 Hb_001163_040 Hb_000080_200--Hb_001163_040 Hb_033376_010 Hb_033376_010 Hb_000080_200--Hb_033376_010 Hb_000023_290 Hb_000023_290 Hb_000080_200--Hb_000023_290 Hb_005045_070 Hb_005045_070 Hb_000080_200--Hb_005045_070 Hb_000162_220 Hb_000162_220 Hb_000080_200--Hb_000162_220 Hb_007009_010 Hb_007009_010 Hb_001638_320--Hb_007009_010 Hb_001252_210 Hb_001252_210 Hb_001638_320--Hb_001252_210 Hb_003414_050 Hb_003414_050 Hb_001638_320--Hb_003414_050 Hb_024758_010 Hb_024758_010 Hb_001638_320--Hb_024758_010 Hb_000701_100 Hb_000701_100 Hb_001638_320--Hb_000701_100 Hb_009615_070 Hb_009615_070 Hb_001638_320--Hb_009615_070 Hb_011512_050 Hb_011512_050 Hb_001163_040--Hb_011512_050 Hb_002078_260 Hb_002078_260 Hb_001163_040--Hb_002078_260 Hb_001220_010 Hb_001220_010 Hb_001163_040--Hb_001220_010 Hb_006452_110 Hb_006452_110 Hb_001163_040--Hb_006452_110 Hb_007894_230 Hb_007894_230 Hb_001163_040--Hb_007894_230 Hb_080601_020 Hb_080601_020 Hb_001163_040--Hb_080601_020 Hb_000130_100 Hb_000130_100 Hb_033376_010--Hb_000130_100 Hb_000975_180 Hb_000975_180 Hb_033376_010--Hb_000975_180 Hb_000463_130 Hb_000463_130 Hb_033376_010--Hb_000463_130 Hb_000181_380 Hb_000181_380 Hb_033376_010--Hb_000181_380 Hb_001922_180 Hb_001922_180 Hb_033376_010--Hb_001922_180 Hb_021924_010 Hb_021924_010 Hb_033376_010--Hb_021924_010 Hb_002133_020 Hb_002133_020 Hb_000023_290--Hb_002133_020 Hb_000016_060 Hb_000016_060 Hb_000023_290--Hb_000016_060 Hb_004176_070 Hb_004176_070 Hb_000023_290--Hb_004176_070 Hb_000733_080 Hb_000733_080 Hb_000023_290--Hb_000733_080 Hb_000359_090 Hb_000359_090 Hb_000023_290--Hb_000359_090 Hb_001747_030 Hb_001747_030 Hb_000023_290--Hb_001747_030 Hb_002324_010 Hb_002324_010 Hb_005045_070--Hb_002324_010 Hb_001172_100 Hb_001172_100 Hb_005045_070--Hb_001172_100 Hb_072922_020 Hb_072922_020 Hb_005045_070--Hb_072922_020 Hb_006452_040 Hb_006452_040 Hb_005045_070--Hb_006452_040 Hb_000087_130 Hb_000087_130 Hb_005045_070--Hb_000087_130 Hb_003376_190 Hb_003376_190 Hb_005045_070--Hb_003376_190 Hb_000407_070 Hb_000407_070 Hb_000162_220--Hb_000407_070 Hb_000390_140 Hb_000390_140 Hb_000162_220--Hb_000390_140 Hb_000162_220--Hb_000023_290 Hb_000362_180 Hb_000362_180 Hb_000162_220--Hb_000362_180 Hb_006117_060 Hb_006117_060 Hb_000162_220--Hb_006117_060 Hb_000072_210 Hb_000072_210 Hb_000162_220--Hb_000072_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.137957 0.099466 0 0.432321 0 0.102136
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.303301 0.318061 0.146378 0.0479628 0.0813461

CAGE analysis