Hb_179645_010

Information

Type -
Description -
Location Contig179645: 55-312
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_179645_010 0.0 - - -
2 Hb_004108_190 0.2552265945 - - PREDICTED: protein catecholamines up-like [Jatropha curcas]
3 Hb_019333_010 0.256757202 - - PREDICTED: uncharacterized protein LOC105633210 [Jatropha curcas]
4 Hb_000840_260 0.2608008207 transcription factor TF Family: GRAS hypothetical protein POPTR_0019s02540g [Populus trichocarpa]
5 Hb_000179_060 0.2812763541 - - hypothetical protein POPTR_0010s23130g, partial [Populus trichocarpa]
6 Hb_010050_040 0.2869622084 - - PREDICTED: protein FANTASTIC FOUR 1 [Jatropha curcas]
7 Hb_004954_020 0.2880664749 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 isoform X2 [Jatropha curcas]
8 Hb_019837_020 0.3012958904 - - -
9 Hb_000248_110 0.3014488876 - - hypothetical protein VITISV_037580 [Vitis vinifera]
10 Hb_004064_030 0.3021877615 - - aldose-1-epimerase, putative [Ricinus communis]
11 Hb_067118_010 0.3064253811 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
12 Hb_134326_010 0.3103782375 - - PREDICTED: uncharacterized protein LOC105638562 [Jatropha curcas]
13 Hb_006717_010 0.3115632232 - - PREDICTED: uncharacterized protein LOC105649338 [Jatropha curcas]
14 Hb_000370_070 0.3173044418 - - PREDICTED: subtilisin-like protease-like [Citrus sinensis]
15 Hb_000221_090 0.3192356157 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
16 Hb_017434_070 0.3208146501 - - transcription factor, putative [Ricinus communis]
17 Hb_002028_280 0.3209977306 - - hypothetical protein RCOM_1397400 [Ricinus communis]
18 Hb_000042_060 0.3255704418 - - PREDICTED: uncharacterized protein LOC105632794 [Jatropha curcas]
19 Hb_000418_120 0.3316638702 - - PREDICTED: glucan endo-1,3-beta-glucosidase [Jatropha curcas]
20 Hb_011994_070 0.332543399 - - PREDICTED: ras-related protein RABC2a-like isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_179645_010 Hb_179645_010 Hb_004108_190 Hb_004108_190 Hb_179645_010--Hb_004108_190 Hb_019333_010 Hb_019333_010 Hb_179645_010--Hb_019333_010 Hb_000840_260 Hb_000840_260 Hb_179645_010--Hb_000840_260 Hb_000179_060 Hb_000179_060 Hb_179645_010--Hb_000179_060 Hb_010050_040 Hb_010050_040 Hb_179645_010--Hb_010050_040 Hb_004954_020 Hb_004954_020 Hb_179645_010--Hb_004954_020 Hb_002028_280 Hb_002028_280 Hb_004108_190--Hb_002028_280 Hb_114271_010 Hb_114271_010 Hb_004108_190--Hb_114271_010 Hb_000215_230 Hb_000215_230 Hb_004108_190--Hb_000215_230 Hb_024066_040 Hb_024066_040 Hb_004108_190--Hb_024066_040 Hb_004108_190--Hb_004954_020 Hb_000392_210 Hb_000392_210 Hb_004108_190--Hb_000392_210 Hb_000042_060 Hb_000042_060 Hb_019333_010--Hb_000042_060 Hb_000370_070 Hb_000370_070 Hb_019333_010--Hb_000370_070 Hb_000236_160 Hb_000236_160 Hb_019333_010--Hb_000236_160 Hb_000417_020 Hb_000417_020 Hb_019333_010--Hb_000417_020 Hb_001538_020 Hb_001538_020 Hb_019333_010--Hb_001538_020 Hb_001269_520 Hb_001269_520 Hb_019333_010--Hb_001269_520 Hb_011994_070 Hb_011994_070 Hb_000840_260--Hb_011994_070 Hb_000840_260--Hb_004954_020 Hb_000840_260--Hb_004108_190 Hb_000483_330 Hb_000483_330 Hb_000840_260--Hb_000483_330 Hb_000840_260--Hb_002028_280 Hb_000201_010 Hb_000201_010 Hb_000179_060--Hb_000201_010 Hb_000258_230 Hb_000258_230 Hb_000179_060--Hb_000258_230 Hb_002043_070 Hb_002043_070 Hb_000179_060--Hb_002043_070 Hb_009771_040 Hb_009771_040 Hb_000179_060--Hb_009771_040 Hb_002250_140 Hb_002250_140 Hb_000179_060--Hb_002250_140 Hb_005211_210 Hb_005211_210 Hb_000179_060--Hb_005211_210 Hb_010050_040--Hb_000179_060 Hb_129230_010 Hb_129230_010 Hb_010050_040--Hb_129230_010 Hb_002785_010 Hb_002785_010 Hb_010050_040--Hb_002785_010 Hb_000752_040 Hb_000752_040 Hb_010050_040--Hb_000752_040 Hb_005725_160 Hb_005725_160 Hb_010050_040--Hb_005725_160 Hb_003008_020 Hb_003008_020 Hb_010050_040--Hb_003008_020 Hb_004954_020--Hb_114271_010 Hb_001148_060 Hb_001148_060 Hb_004954_020--Hb_001148_060 Hb_014361_030 Hb_014361_030 Hb_004954_020--Hb_014361_030 Hb_002542_060 Hb_002542_060 Hb_004954_020--Hb_002542_060 Hb_004954_020--Hb_011994_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.74566 0.629374 0.255943 0.990306 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.62788

CAGE analysis