Hb_167776_030

Information

Type -
Description -
Location Contig167776: 30973-32883
Sequence    

Annotation

kegg
ID tcc:TCM_022020
description Exocyst subunit exo70 family protein H4
nr
ID XP_012074854.1
description PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID A0A067KH55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09009 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167776_030 0.0 - - PREDICTED: exocyst complex component EXO70A1-like [Jatropha curcas]
2 Hb_010050_050 0.1719666563 - - PREDICTED: piezo-type mechanosensitive ion channel homolog isoform X2 [Jatropha curcas]
3 Hb_001856_200 0.2215188112 - - Esterase PIR7B, putative [Ricinus communis]
4 Hb_003777_050 0.2219788505 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105629120 [Jatropha curcas]
5 Hb_009233_030 0.2250074507 - - protein binding protein, putative [Ricinus communis]
6 Hb_002849_140 0.231872524 - - hypothetical protein JCGZ_14366 [Jatropha curcas]
7 Hb_023344_080 0.2366807314 - - PREDICTED: uncharacterized protein LOC105644472 isoform X1 [Jatropha curcas]
8 Hb_000538_030 0.2389285595 - - glutathione s-transferase, putative [Ricinus communis]
9 Hb_008062_070 0.2389899513 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
10 Hb_000211_030 0.2396203314 - - sugar transporter, putative [Ricinus communis]
11 Hb_001437_130 0.2422472425 - - hypothetical protein F383_15788 [Gossypium arboreum]
12 Hb_000392_310 0.243180642 - - conserved hypothetical protein [Ricinus communis]
13 Hb_010407_180 0.2438085333 - - PREDICTED: phosphoenolpyruvate carboxylase kinase 1-like [Jatropha curcas]
14 Hb_003582_040 0.2460089348 transcription factor TF Family: C2H2 hypothetical protein POPTR_0010s11160g [Populus trichocarpa]
15 Hb_012545_050 0.2489902822 - - PREDICTED: serine carboxypeptidase II-3-like [Jatropha curcas]
16 Hb_001956_070 0.2509826508 - - PREDICTED: telomere repeat-binding protein 2 isoform X2 [Jatropha curcas]
17 Hb_000210_010 0.2512237821 - - PREDICTED: probable CCR4-associated factor 1 homolog 11 [Jatropha curcas]
18 Hb_007558_020 0.2532306345 - - hypothetical protein JCGZ_17631 [Jatropha curcas]
19 Hb_000649_130 0.2538005857 - - Polcalcin Jun o, putative [Ricinus communis]
20 Hb_004032_260 0.2555333963 - - PREDICTED: uncharacterized protein LOC105635147 [Jatropha curcas]

Gene co-expression network

sample Hb_167776_030 Hb_167776_030 Hb_010050_050 Hb_010050_050 Hb_167776_030--Hb_010050_050 Hb_001856_200 Hb_001856_200 Hb_167776_030--Hb_001856_200 Hb_003777_050 Hb_003777_050 Hb_167776_030--Hb_003777_050 Hb_009233_030 Hb_009233_030 Hb_167776_030--Hb_009233_030 Hb_002849_140 Hb_002849_140 Hb_167776_030--Hb_002849_140 Hb_023344_080 Hb_023344_080 Hb_167776_030--Hb_023344_080 Hb_000975_360 Hb_000975_360 Hb_010050_050--Hb_000975_360 Hb_000649_130 Hb_000649_130 Hb_010050_050--Hb_000649_130 Hb_021888_050 Hb_021888_050 Hb_010050_050--Hb_021888_050 Hb_010050_050--Hb_001856_200 Hb_008643_200 Hb_008643_200 Hb_010050_050--Hb_008643_200 Hb_003972_080 Hb_003972_080 Hb_010050_050--Hb_003972_080 Hb_002217_020 Hb_002217_020 Hb_001856_200--Hb_002217_020 Hb_001825_060 Hb_001825_060 Hb_001856_200--Hb_001825_060 Hb_000987_060 Hb_000987_060 Hb_001856_200--Hb_000987_060 Hb_000210_010 Hb_000210_010 Hb_001856_200--Hb_000210_010 Hb_141990_040 Hb_141990_040 Hb_001856_200--Hb_141990_040 Hb_000009_450 Hb_000009_450 Hb_001856_200--Hb_000009_450 Hb_003777_050--Hb_000009_450 Hb_000110_320 Hb_000110_320 Hb_003777_050--Hb_000110_320 Hb_001437_130 Hb_001437_130 Hb_003777_050--Hb_001437_130 Hb_024468_020 Hb_024468_020 Hb_003777_050--Hb_024468_020 Hb_003777_050--Hb_001856_200 Hb_003777_050--Hb_141990_040 Hb_002110_240 Hb_002110_240 Hb_009233_030--Hb_002110_240 Hb_005663_070 Hb_005663_070 Hb_009233_030--Hb_005663_070 Hb_000256_130 Hb_000256_130 Hb_009233_030--Hb_000256_130 Hb_006909_060 Hb_006909_060 Hb_009233_030--Hb_006909_060 Hb_000008_110 Hb_000008_110 Hb_009233_030--Hb_000008_110 Hb_000023_250 Hb_000023_250 Hb_009233_030--Hb_000023_250 Hb_128524_020 Hb_128524_020 Hb_002849_140--Hb_128524_020 Hb_000538_030 Hb_000538_030 Hb_002849_140--Hb_000538_030 Hb_001123_200 Hb_001123_200 Hb_002849_140--Hb_001123_200 Hb_004965_050 Hb_004965_050 Hb_002849_140--Hb_004965_050 Hb_002849_140--Hb_006909_060 Hb_000394_110 Hb_000394_110 Hb_002849_140--Hb_000394_110 Hb_000788_060 Hb_000788_060 Hb_023344_080--Hb_000788_060 Hb_023344_080--Hb_001856_200 Hb_023344_080--Hb_006909_060 Hb_023344_080--Hb_000987_060 Hb_001619_040 Hb_001619_040 Hb_023344_080--Hb_001619_040 Hb_000239_020 Hb_000239_020 Hb_023344_080--Hb_000239_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.80128 2.42147 1.05471 1.15101 0.127093 0.0100983
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.54312 3.34358 3.67921 0.475823 0.0394216

CAGE analysis