Hb_128524_020

Information

Type -
Description -
Location Contig128524: 12661-17853
Sequence    

Annotation

kegg
ID rcu:RCOM_1351730
description Aspartic proteinase Asp1 precursor, putative (EC:3.4.23.3)
nr
ID XP_012082516.1
description PREDICTED: aspartic proteinase-like protein 2 isoform X2 [Jatropha curcas]
swissprot
ID Q9S9K4
description Aspartic proteinase-like protein 2 OS=Arabidopsis thaliana GN=At1g65240 PE=1 SV=2
trembl
ID A0A067JZE5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16606 PE=4 SV=1
Gene Ontology
ID GO:0005622
description aspartic proteinase-like protein 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_08713: 17030-17299 , PASA_asmbl_08714: 12629-17823 , PASA_asmbl_08715: 12629-17517
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_128524_020 0.0 - - PREDICTED: aspartic proteinase-like protein 2 isoform X2 [Jatropha curcas]
2 Hb_002849_140 0.1589622098 - - hypothetical protein JCGZ_14366 [Jatropha curcas]
3 Hb_004965_050 0.1959905156 - - PREDICTED: uncharacterized protein LOC105645055 [Jatropha curcas]
4 Hb_002675_200 0.201934477 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA1, putative [Ricinus communis]
5 Hb_031822_010 0.2059898079 - - PREDICTED: uncharacterized protein LOC103496015 [Cucumis melo]
6 Hb_003001_020 0.2137109452 - - hypothetical protein JCGZ_17508 [Jatropha curcas]
7 Hb_168707_040 0.2173952192 transcription factor TF Family: ERF DNA binding protein, putative [Ricinus communis]
8 Hb_003147_070 0.2200068384 transcription factor TF Family: NAC PREDICTED: transcription factor JUNGBRUNNEN 1-like [Jatropha curcas]
9 Hb_000510_230 0.2382504621 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
10 Hb_004920_070 0.239308882 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
11 Hb_128486_010 0.2412921065 - - PREDICTED: U-box domain-containing protein 28 [Jatropha curcas]
12 Hb_000072_190 0.2416010586 - - putative S-adenosylmethionine decarboxylase [Prunus dulcis]
13 Hb_156850_080 0.2426139085 - - PREDICTED: uncharacterized protein LOC105635247 [Jatropha curcas]
14 Hb_001636_060 0.243366843 - - Putative serine/threonine-protein kinase-like protein CCR3 [Glycine soja]
15 Hb_000139_100 0.2478332412 - - PREDICTED: sugar transport protein 13-like [Jatropha curcas]
16 Hb_000069_240 0.2496488388 - - PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3-like [Jatropha curcas]
17 Hb_000672_150 0.2513829353 - - Patatin T5 precursor, putative [Ricinus communis]
18 Hb_007558_020 0.2539843371 - - hypothetical protein JCGZ_17631 [Jatropha curcas]
19 Hb_001123_200 0.2542735193 - - conserved hypothetical protein [Ricinus communis]
20 Hb_006120_150 0.2555228649 - - invertase [Hevea brasiliensis]

Gene co-expression network

sample Hb_128524_020 Hb_128524_020 Hb_002849_140 Hb_002849_140 Hb_128524_020--Hb_002849_140 Hb_004965_050 Hb_004965_050 Hb_128524_020--Hb_004965_050 Hb_002675_200 Hb_002675_200 Hb_128524_020--Hb_002675_200 Hb_031822_010 Hb_031822_010 Hb_128524_020--Hb_031822_010 Hb_003001_020 Hb_003001_020 Hb_128524_020--Hb_003001_020 Hb_168707_040 Hb_168707_040 Hb_128524_020--Hb_168707_040 Hb_000538_030 Hb_000538_030 Hb_002849_140--Hb_000538_030 Hb_001123_200 Hb_001123_200 Hb_002849_140--Hb_001123_200 Hb_002849_140--Hb_004965_050 Hb_006909_060 Hb_006909_060 Hb_002849_140--Hb_006909_060 Hb_000394_110 Hb_000394_110 Hb_002849_140--Hb_000394_110 Hb_002685_200 Hb_002685_200 Hb_004965_050--Hb_002685_200 Hb_000179_240 Hb_000179_240 Hb_004965_050--Hb_000179_240 Hb_003077_050 Hb_003077_050 Hb_004965_050--Hb_003077_050 Hb_000072_190 Hb_000072_190 Hb_004965_050--Hb_000072_190 Hb_004117_170 Hb_004117_170 Hb_004965_050--Hb_004117_170 Hb_171900_020 Hb_171900_020 Hb_004965_050--Hb_171900_020 Hb_001470_070 Hb_001470_070 Hb_002675_200--Hb_001470_070 Hb_011618_100 Hb_011618_100 Hb_002675_200--Hb_011618_100 Hb_128486_010 Hb_128486_010 Hb_002675_200--Hb_128486_010 Hb_089140_110 Hb_089140_110 Hb_002675_200--Hb_089140_110 Hb_008768_020 Hb_008768_020 Hb_002675_200--Hb_008768_020 Hb_031822_010--Hb_000072_190 Hb_003147_070 Hb_003147_070 Hb_031822_010--Hb_003147_070 Hb_000046_310 Hb_000046_310 Hb_031822_010--Hb_000046_310 Hb_004994_250 Hb_004994_250 Hb_031822_010--Hb_004994_250 Hb_018790_050 Hb_018790_050 Hb_031822_010--Hb_018790_050 Hb_013358_020 Hb_013358_020 Hb_031822_010--Hb_013358_020 Hb_168319_010 Hb_168319_010 Hb_003001_020--Hb_168319_010 Hb_025708_010 Hb_025708_010 Hb_003001_020--Hb_025708_010 Hb_025708_020 Hb_025708_020 Hb_003001_020--Hb_025708_020 Hb_012423_060 Hb_012423_060 Hb_003001_020--Hb_012423_060 Hb_165026_010 Hb_165026_010 Hb_003001_020--Hb_165026_010 Hb_000802_110 Hb_000802_110 Hb_168707_040--Hb_000802_110 Hb_000672_150 Hb_000672_150 Hb_168707_040--Hb_000672_150 Hb_027467_010 Hb_027467_010 Hb_168707_040--Hb_027467_010 Hb_000139_100 Hb_000139_100 Hb_168707_040--Hb_000139_100 Hb_002766_050 Hb_002766_050 Hb_168707_040--Hb_002766_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.770112 39.2687 29.9491 11.0056 0.311449 0.112615
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.91266 21.4507 19.3981 2.80217 2.24967

CAGE analysis