Hb_167300_010

Information

Type -
Description -
Location Contig167300: 2157-3073
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_167300_010 0.0 - - -
2 Hb_001965_010 0.2068618249 - - PREDICTED: uncharacterized protein LOC104106381 [Nicotiana tomentosiformis]
3 Hb_001496_030 0.2409334076 - - hypothetical protein CISIN_1g0170981mg, partial [Citrus sinensis]
4 Hb_002733_030 0.2756831593 - - PREDICTED: uncharacterized protein LOC104248159 [Nicotiana sylvestris]
5 Hb_004103_030 0.301120729 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002774_040 0.3031610331 - - PREDICTED: annexin D1 [Jatropha curcas]
7 Hb_003861_020 0.3162135905 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like isoform X2 [Nelumbo nucifera]
8 Hb_025457_010 0.3269124026 - - -
9 Hb_000189_230 0.3283198124 - - Auxin-induced protein [Aegilops tauschii]
10 Hb_183443_010 0.3328259001 - - PREDICTED: uncharacterized protein LOC105786773 [Gossypium raimondii]
11 Hb_011639_040 0.3386480438 - - hypothetical protein M569_08265, partial [Genlisea aurea]
12 Hb_097968_010 0.3388726924 - - hypothetical protein PRUPE_ppa001143mg [Prunus persica]
13 Hb_002686_380 0.3401557449 - - -
14 Hb_006370_040 0.3486903973 - - PREDICTED: uncharacterized protein LOC105647154 [Jatropha curcas]
15 Hb_003117_040 0.3519288009 - - cytochrome P450, putative [Ricinus communis]
16 Hb_001545_210 0.352367149 - - hypothetical protein JCGZ_11132 [Jatropha curcas]
17 Hb_002028_100 0.3533649973 - - PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
18 Hb_005273_040 0.3553508057 - - -
19 Hb_001703_120 0.3587258721 - - PREDICTED: uncharacterized protein LOC105116966 isoform X2 [Populus euphratica]
20 Hb_002289_130 0.3604789976 transcription factor TF Family: C2H2 arsenite inducuble RNA associated protein aip-1, putative [Ricinus communis]

Gene co-expression network

sample Hb_167300_010 Hb_167300_010 Hb_001965_010 Hb_001965_010 Hb_167300_010--Hb_001965_010 Hb_001496_030 Hb_001496_030 Hb_167300_010--Hb_001496_030 Hb_002733_030 Hb_002733_030 Hb_167300_010--Hb_002733_030 Hb_004103_030 Hb_004103_030 Hb_167300_010--Hb_004103_030 Hb_002774_040 Hb_002774_040 Hb_167300_010--Hb_002774_040 Hb_003861_020 Hb_003861_020 Hb_167300_010--Hb_003861_020 Hb_001965_010--Hb_001496_030 Hb_001965_010--Hb_002733_030 Hb_002686_380 Hb_002686_380 Hb_001965_010--Hb_002686_380 Hb_007545_020 Hb_007545_020 Hb_001965_010--Hb_007545_020 Hb_001703_120 Hb_001703_120 Hb_001965_010--Hb_001703_120 Hb_032920_100 Hb_032920_100 Hb_001496_030--Hb_032920_100 Hb_001965_020 Hb_001965_020 Hb_001496_030--Hb_001965_020 Hb_020411_010 Hb_020411_010 Hb_001496_030--Hb_020411_010 Hb_002506_100 Hb_002506_100 Hb_001496_030--Hb_002506_100 Hb_025457_010 Hb_025457_010 Hb_002733_030--Hb_025457_010 Hb_002028_100 Hb_002028_100 Hb_002733_030--Hb_002028_100 Hb_002232_450 Hb_002232_450 Hb_002733_030--Hb_002232_450 Hb_003881_050 Hb_003881_050 Hb_002733_030--Hb_003881_050 Hb_002733_030--Hb_002686_380 Hb_097968_010 Hb_097968_010 Hb_004103_030--Hb_097968_010 Hb_183443_010 Hb_183443_010 Hb_004103_030--Hb_183443_010 Hb_000512_070 Hb_000512_070 Hb_004103_030--Hb_000512_070 Hb_001242_090 Hb_001242_090 Hb_004103_030--Hb_001242_090 Hb_000000_100 Hb_000000_100 Hb_004103_030--Hb_000000_100 Hb_007590_070 Hb_007590_070 Hb_004103_030--Hb_007590_070 Hb_006683_030 Hb_006683_030 Hb_002774_040--Hb_006683_030 Hb_000050_130 Hb_000050_130 Hb_002774_040--Hb_000050_130 Hb_005896_010 Hb_005896_010 Hb_002774_040--Hb_005896_010 Hb_002675_120 Hb_002675_120 Hb_002774_040--Hb_002675_120 Hb_000160_100 Hb_000160_100 Hb_002774_040--Hb_000160_100 Hb_003861_020--Hb_001703_120 Hb_000362_120 Hb_000362_120 Hb_003861_020--Hb_000362_120 Hb_012979_020 Hb_012979_020 Hb_003861_020--Hb_012979_020 Hb_000136_040 Hb_000136_040 Hb_003861_020--Hb_000136_040 Hb_010480_030 Hb_010480_030 Hb_003861_020--Hb_010480_030 Hb_012180_020 Hb_012180_020 Hb_003861_020--Hb_012180_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.628973 0 0 0 0.348023 0.495378
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.731292 1.44267 0.40338

CAGE analysis