Hb_165130_010

Information

Type -
Description -
Location Contig165130: 130-672
Sequence    

Annotation

kegg
ID rcu:RCOM_1578690
description hypothetical protein
nr
ID XP_012090038.1
description PREDICTED: uncharacterized protein LOC105648304 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID B9RIF3
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1578690 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_165130_010 0.0 - - PREDICTED: uncharacterized protein LOC105648304 [Jatropha curcas]
2 Hb_000189_120 0.1663361458 transcription factor TF Family: bHLH PREDICTED: transcription factor UNE12-like isoform X5 [Jatropha curcas]
3 Hb_003576_050 0.1696859433 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
4 Hb_002660_100 0.1763189411 - - plasma membrane intrinsic protein [Hevea brasiliensis]
5 Hb_002928_180 0.1775813552 - - catalase CAT1 [Manihot esculenta]
6 Hb_002928_120 0.1820625172 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
7 Hb_011310_200 0.1825487813 - - grr1, plant, putative [Ricinus communis]
8 Hb_000803_100 0.1856462795 - - PREDICTED: uncharacterized protein LOC105648304 [Jatropha curcas]
9 Hb_004195_170 0.1885276173 - - ATP binding protein, putative [Ricinus communis]
10 Hb_117168_010 0.1887423104 - - PREDICTED: putative disease resistance protein RGA1 [Jatropha curcas]
11 Hb_000313_370 0.190086227 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_003517_020 0.1949194197 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 3-like [Jatropha curcas]
13 Hb_000367_310 0.1949244343 - - Brassinosteroid LRR receptor kinase precursor, putative [Ricinus communis]
14 Hb_000928_040 0.1978707765 - - cytochrome P450, putative [Ricinus communis]
15 Hb_001021_030 0.1981083581 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
16 Hb_002662_090 0.200635523 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
17 Hb_001148_040 0.2014006319 - - hypothetical protein JCGZ_07831 [Jatropha curcas]
18 Hb_000976_440 0.2017258766 - - UDP-glucosyltransferase, putative [Ricinus communis]
19 Hb_009823_010 0.2029802796 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
20 Hb_003299_010 0.2057487252 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_165130_010 Hb_165130_010 Hb_000189_120 Hb_000189_120 Hb_165130_010--Hb_000189_120 Hb_003576_050 Hb_003576_050 Hb_165130_010--Hb_003576_050 Hb_002660_100 Hb_002660_100 Hb_165130_010--Hb_002660_100 Hb_002928_180 Hb_002928_180 Hb_165130_010--Hb_002928_180 Hb_002928_120 Hb_002928_120 Hb_165130_010--Hb_002928_120 Hb_011310_200 Hb_011310_200 Hb_165130_010--Hb_011310_200 Hb_001584_010 Hb_001584_010 Hb_000189_120--Hb_001584_010 Hb_000778_020 Hb_000778_020 Hb_000189_120--Hb_000778_020 Hb_008175_030 Hb_008175_030 Hb_000189_120--Hb_008175_030 Hb_010253_020 Hb_010253_020 Hb_000189_120--Hb_010253_020 Hb_057079_020 Hb_057079_020 Hb_000189_120--Hb_057079_020 Hb_000007_160 Hb_000007_160 Hb_000189_120--Hb_000007_160 Hb_009823_010 Hb_009823_010 Hb_003576_050--Hb_009823_010 Hb_003517_020 Hb_003517_020 Hb_003576_050--Hb_003517_020 Hb_001408_050 Hb_001408_050 Hb_003576_050--Hb_001408_050 Hb_000313_370 Hb_000313_370 Hb_003576_050--Hb_000313_370 Hb_001248_030 Hb_001248_030 Hb_003576_050--Hb_001248_030 Hb_000928_040 Hb_000928_040 Hb_003576_050--Hb_000928_040 Hb_000608_020 Hb_000608_020 Hb_002660_100--Hb_000608_020 Hb_004195_170 Hb_004195_170 Hb_002660_100--Hb_004195_170 Hb_051100_010 Hb_051100_010 Hb_002660_100--Hb_051100_010 Hb_001148_040 Hb_001148_040 Hb_002660_100--Hb_001148_040 Hb_000429_110 Hb_000429_110 Hb_002660_100--Hb_000429_110 Hb_002928_180--Hb_000429_110 Hb_000236_110 Hb_000236_110 Hb_002928_180--Hb_000236_110 Hb_002928_180--Hb_000778_020 Hb_002928_180--Hb_002928_120 Hb_010174_190 Hb_010174_190 Hb_002928_180--Hb_010174_190 Hb_001410_010 Hb_001410_010 Hb_002928_180--Hb_001410_010 Hb_000793_040 Hb_000793_040 Hb_002928_120--Hb_000793_040 Hb_001021_030 Hb_001021_030 Hb_002928_120--Hb_001021_030 Hb_025432_010 Hb_025432_010 Hb_002928_120--Hb_025432_010 Hb_002928_120--Hb_000429_110 Hb_002928_120--Hb_000236_110 Hb_001251_060 Hb_001251_060 Hb_011310_200--Hb_001251_060 Hb_011310_200--Hb_057079_020 Hb_011310_200--Hb_001410_010 Hb_000866_370 Hb_000866_370 Hb_011310_200--Hb_000866_370 Hb_000216_020 Hb_000216_020 Hb_011310_200--Hb_000216_020 Hb_001544_080 Hb_001544_080 Hb_011310_200--Hb_001544_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.243273 2.20748 0.19553 1.36239 0.348817 0.167485
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0923928 0.31801 2.51752 0.175697

CAGE analysis