Hb_165101_010

Information

Type -
Description -
Location Contig165101: 1280-1738
Sequence    

Annotation

kegg
ID vvi:100252663
description wall-associated receptor kinase 2-like
nr
ID XP_010256322.1
description PREDICTED: putative wall-associated receptor kinase-like 16 [Nelumbo nucifera]
swissprot
ID Q9LMN8
description Wall-associated receptor kinase 3 OS=Arabidopsis thaliana GN=WAK3 PE=2 SV=2
trembl
ID F6GSN9
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g02100 PE=4 SV=1
Gene Ontology
ID GO:0000166
description wall-associated receptor kinase-like 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_165101_010 0.0 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Nelumbo nucifera]
2 Hb_016297_010 0.1002883432 - - PREDICTED: uncharacterized protein LOC105638665 [Jatropha curcas]
3 Hb_002276_220 0.1012951049 - - PREDICTED: uncharacterized protein LOC105640684 isoform X2 [Jatropha curcas]
4 Hb_005460_040 0.1079602508 - - PREDICTED: long chain acyl-CoA synthetase 2 [Jatropha curcas]
5 Hb_001300_190 0.1111398743 - - conserved hypothetical protein [Ricinus communis]
6 Hb_004553_050 0.1114107871 - - PREDICTED: probable inactive receptor kinase At5g10020 [Jatropha curcas]
7 Hb_008021_060 0.1116161756 - - Squalene monooxygenase, putative [Ricinus communis]
8 Hb_001511_210 0.1138700785 - - PREDICTED: protein ESKIMO 1-like [Jatropha curcas]
9 Hb_008147_020 0.1165091063 - - hypothetical protein JCGZ_25652 [Jatropha curcas]
10 Hb_034235_010 0.1169367322 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
11 Hb_000510_250 0.118409039 transcription factor TF Family: AUX/IAA auxin-induced protein aux28 [Populus trichocarpa]
12 Hb_002704_060 0.1222050527 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
13 Hb_000722_030 0.1225543324 - - putative plant disease resistance family protein [Populus trichocarpa]
14 Hb_023827_030 0.12273322 - - PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic-like [Populus euphratica]
15 Hb_019053_040 0.1233044066 - - cytochrome P450, putative [Ricinus communis]
16 Hb_000189_300 0.1238893592 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
17 Hb_001374_050 0.125355397 - - PREDICTED: subtilisin-like protease SBT5.3 [Jatropha curcas]
18 Hb_012675_040 0.1261455383 - - PREDICTED: uncharacterized protein LOC105647773 isoform X1 [Jatropha curcas]
19 Hb_002301_120 0.1264826819 - - PREDICTED: uncharacterized protein LOC105649581 [Jatropha curcas]
20 Hb_001166_010 0.1281125786 - - S-locus-specific glycoprotein S13 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_165101_010 Hb_165101_010 Hb_016297_010 Hb_016297_010 Hb_165101_010--Hb_016297_010 Hb_002276_220 Hb_002276_220 Hb_165101_010--Hb_002276_220 Hb_005460_040 Hb_005460_040 Hb_165101_010--Hb_005460_040 Hb_001300_190 Hb_001300_190 Hb_165101_010--Hb_001300_190 Hb_004553_050 Hb_004553_050 Hb_165101_010--Hb_004553_050 Hb_008021_060 Hb_008021_060 Hb_165101_010--Hb_008021_060 Hb_023827_030 Hb_023827_030 Hb_016297_010--Hb_023827_030 Hb_023582_010 Hb_023582_010 Hb_016297_010--Hb_023582_010 Hb_000722_030 Hb_000722_030 Hb_016297_010--Hb_000722_030 Hb_019053_040 Hb_019053_040 Hb_016297_010--Hb_019053_040 Hb_001258_130 Hb_001258_130 Hb_016297_010--Hb_001258_130 Hb_105148_020 Hb_105148_020 Hb_016297_010--Hb_105148_020 Hb_000189_300 Hb_000189_300 Hb_002276_220--Hb_000189_300 Hb_001789_220 Hb_001789_220 Hb_002276_220--Hb_001789_220 Hb_034235_010 Hb_034235_010 Hb_002276_220--Hb_034235_010 Hb_007681_010 Hb_007681_010 Hb_002276_220--Hb_007681_010 Hb_041433_010 Hb_041433_010 Hb_002276_220--Hb_041433_010 Hb_001206_110 Hb_001206_110 Hb_002276_220--Hb_001206_110 Hb_005460_040--Hb_004553_050 Hb_001374_050 Hb_001374_050 Hb_005460_040--Hb_001374_050 Hb_002042_090 Hb_002042_090 Hb_005460_040--Hb_002042_090 Hb_005460_040--Hb_001300_190 Hb_005460_040--Hb_001789_220 Hb_001166_010 Hb_001166_010 Hb_005460_040--Hb_001166_010 Hb_000739_010 Hb_000739_010 Hb_001300_190--Hb_000739_010 Hb_001646_030 Hb_001646_030 Hb_001300_190--Hb_001646_030 Hb_001300_190--Hb_004553_050 Hb_002259_120 Hb_002259_120 Hb_001300_190--Hb_002259_120 Hb_012675_040 Hb_012675_040 Hb_001300_190--Hb_012675_040 Hb_012807_040 Hb_012807_040 Hb_001300_190--Hb_012807_040 Hb_004553_050--Hb_001374_050 Hb_004553_050--Hb_001789_220 Hb_001253_050 Hb_001253_050 Hb_004553_050--Hb_001253_050 Hb_001205_140 Hb_001205_140 Hb_004553_050--Hb_001205_140 Hb_001652_100 Hb_001652_100 Hb_008021_060--Hb_001652_100 Hb_007922_030 Hb_007922_030 Hb_008021_060--Hb_007922_030 Hb_000058_180 Hb_000058_180 Hb_008021_060--Hb_000058_180 Hb_008147_020 Hb_008147_020 Hb_008021_060--Hb_008147_020 Hb_132840_190 Hb_132840_190 Hb_008021_060--Hb_132840_190 Hb_007120_120 Hb_007120_120 Hb_008021_060--Hb_007120_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0569603 6.64508 2.9701 0.0620699 0.178402
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.153287 3.79169

CAGE analysis