Hb_158803_020

Information

Type -
Description -
Location Contig158803: 9506-10669
Sequence    

Annotation

kegg
ID vvi:100255980
description probable LRR receptor-like serine/threonine-protein kinase At4g08850
nr
ID KDP33341.1
description hypothetical protein JCGZ_12890 [Jatropha curcas]
swissprot
ID Q8VZG8
description Probable LRR receptor-like serine/threonine-protein kinase At4g08850 OS=Arabidopsis thaliana GN=At4g08850 PE=2 SV=3
trembl
ID A0A067KAU4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12890 PE=4 SV=1
Gene Ontology
ID GO:0016772
description probable lrr receptor-like serine threonine-protein kinase at4g08850

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_158803_020 0.0 - - hypothetical protein JCGZ_12890 [Jatropha curcas]
2 Hb_048476_160 0.1761482843 - - hypothetical protein JCGZ_19593 [Jatropha curcas]
3 Hb_083862_010 0.2133954102 - - hypothetical protein JCGZ_17956 [Jatropha curcas]
4 Hb_107495_050 0.2268805294 transcription factor TF Family: MIKC mads box protein, putative [Ricinus communis]
5 Hb_125981_010 0.2271865886 - - hypothetical protein POPTR_0005s042901g, partial [Populus trichocarpa]
6 Hb_102129_010 0.2296717836 - - multicopper oxidase, putative [Ricinus communis]
7 Hb_009773_040 0.2307024246 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001147_090 0.242890441 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
9 Hb_003142_100 0.2440150461 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Eucalyptus grandis]
10 Hb_003939_020 0.2481182861 - - PREDICTED: zinc finger protein KNUCKLES [Jatropha curcas]
11 Hb_000029_280 0.2542700904 - - PREDICTED: uncharacterized protein LOC105631804 [Jatropha curcas]
12 Hb_001147_080 0.2574946353 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
13 Hb_127628_010 0.2582909215 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
14 Hb_005588_140 0.2585695574 - - conserved hypothetical protein [Ricinus communis]
15 Hb_012423_020 0.2665708594 - - hypothetical protein JCGZ_20730 [Jatropha curcas]
16 Hb_000659_020 0.2672323276 - - PREDICTED: putative L-type lectin-domain containing receptor kinase II.2 [Jatropha curcas]
17 Hb_000072_310 0.2698442973 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 43-like [Jatropha curcas]
18 Hb_002078_210 0.2712348559 - - PREDICTED: cytochrome P450 78A5-like [Jatropha curcas]
19 Hb_136027_010 0.2715262712 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
20 Hb_000483_230 0.2722739836 - - PREDICTED: cationic amino acid transporter 6, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_158803_020 Hb_158803_020 Hb_048476_160 Hb_048476_160 Hb_158803_020--Hb_048476_160 Hb_083862_010 Hb_083862_010 Hb_158803_020--Hb_083862_010 Hb_107495_050 Hb_107495_050 Hb_158803_020--Hb_107495_050 Hb_125981_010 Hb_125981_010 Hb_158803_020--Hb_125981_010 Hb_102129_010 Hb_102129_010 Hb_158803_020--Hb_102129_010 Hb_009773_040 Hb_009773_040 Hb_158803_020--Hb_009773_040 Hb_048476_160--Hb_102129_010 Hb_003438_060 Hb_003438_060 Hb_048476_160--Hb_003438_060 Hb_001147_090 Hb_001147_090 Hb_048476_160--Hb_001147_090 Hb_001147_080 Hb_001147_080 Hb_048476_160--Hb_001147_080 Hb_000483_230 Hb_000483_230 Hb_048476_160--Hb_000483_230 Hb_083862_010--Hb_107495_050 Hb_004162_030 Hb_004162_030 Hb_083862_010--Hb_004162_030 Hb_002422_030 Hb_002422_030 Hb_083862_010--Hb_002422_030 Hb_012423_020 Hb_012423_020 Hb_083862_010--Hb_012423_020 Hb_002639_090 Hb_002639_090 Hb_083862_010--Hb_002639_090 Hb_000072_310 Hb_000072_310 Hb_083862_010--Hb_000072_310 Hb_005588_140 Hb_005588_140 Hb_107495_050--Hb_005588_140 Hb_107495_050--Hb_000072_310 Hb_000087_180 Hb_000087_180 Hb_107495_050--Hb_000087_180 Hb_107495_050--Hb_002639_090 Hb_000506_140 Hb_000506_140 Hb_107495_050--Hb_000506_140 Hb_116685_010 Hb_116685_010 Hb_125981_010--Hb_116685_010 Hb_155642_010 Hb_155642_010 Hb_125981_010--Hb_155642_010 Hb_127819_010 Hb_127819_010 Hb_125981_010--Hb_127819_010 Hb_090459_010 Hb_090459_010 Hb_125981_010--Hb_090459_010 Hb_003893_020 Hb_003893_020 Hb_125981_010--Hb_003893_020 Hb_000960_010 Hb_000960_010 Hb_125981_010--Hb_000960_010 Hb_102129_010--Hb_001147_090 Hb_102129_010--Hb_001147_080 Hb_145708_010 Hb_145708_010 Hb_102129_010--Hb_145708_010 Hb_010810_040 Hb_010810_040 Hb_102129_010--Hb_010810_040 Hb_181810_010 Hb_181810_010 Hb_009773_040--Hb_181810_010 Hb_005568_060 Hb_005568_060 Hb_009773_040--Hb_005568_060 Hb_016404_010 Hb_016404_010 Hb_009773_040--Hb_016404_010 Hb_003939_020 Hb_003939_020 Hb_009773_040--Hb_003939_020 Hb_009773_040--Hb_012423_020 Hb_136027_010 Hb_136027_010 Hb_009773_040--Hb_136027_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.39549 0.0282832 0.103455 0.0899081 0.0161904
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis