Hb_145708_010

Information

Type -
Description -
Location Contig145708: 383-1850
Sequence    

Annotation

kegg
ID pop:POPTR_0011s03360g
description POPTRDRAFT_660506; hypothetical protein
nr
ID XP_012091423.1
description PREDICTED: transcription factor ILR3-like isoform X1 [Jatropha curcas]
swissprot
ID Q9FH37
description Transcription factor ILR3 OS=Arabidopsis thaliana GN=ILR3 PE=1 SV=1
trembl
ID A0A067JLE2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21291 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145708_010 0.0 - - PREDICTED: transcription factor ILR3-like isoform X1 [Jatropha curcas]
2 Hb_005654_020 0.1526817299 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
3 Hb_102129_010 0.2234096677 - - multicopper oxidase, putative [Ricinus communis]
4 Hb_001147_090 0.2400458022 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
5 Hb_001147_080 0.2728789318 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
6 Hb_003438_060 0.2816283114 - - -
7 Hb_048476_160 0.2861005373 - - hypothetical protein JCGZ_19593 [Jatropha curcas]
8 Hb_010810_040 0.2904285229 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
9 Hb_000008_040 0.3276994684 - - hypothetical protein POPTR_0009s01550g [Populus trichocarpa]
10 Hb_003581_160 0.334998398 - - -
11 Hb_000122_060 0.3358461896 - - PREDICTED: protein LURP-one-related 14 [Jatropha curcas]
12 Hb_125948_010 0.340237711 - - heat-shock protein, putative [Ricinus communis]
13 Hb_000465_360 0.3435477234 - - hypothetical protein CISIN_1g024854mg [Citrus sinensis]
14 Hb_002984_020 0.3456131905 - - hypothetical protein EUGRSUZ_J02661 [Eucalyptus grandis]
15 Hb_000321_010 0.3486295286 - - Chitinase 1 precursor, putative [Ricinus communis]
16 Hb_137914_010 0.3490584678 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
17 Hb_001862_080 0.3530244349 - - hypothetical protein RCOM_1154950 [Ricinus communis]
18 Hb_000000_430 0.3562175249 - - hypothetical protein POPTR_0014s04130g [Populus trichocarpa]
19 Hb_002588_020 0.3598220097 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
20 Hb_001269_570 0.3621578329 - - hypothetical protein POPTR_0001s03430g [Populus trichocarpa]

Gene co-expression network

sample Hb_145708_010 Hb_145708_010 Hb_005654_020 Hb_005654_020 Hb_145708_010--Hb_005654_020 Hb_102129_010 Hb_102129_010 Hb_145708_010--Hb_102129_010 Hb_001147_090 Hb_001147_090 Hb_145708_010--Hb_001147_090 Hb_001147_080 Hb_001147_080 Hb_145708_010--Hb_001147_080 Hb_003438_060 Hb_003438_060 Hb_145708_010--Hb_003438_060 Hb_048476_160 Hb_048476_160 Hb_145708_010--Hb_048476_160 Hb_003581_160 Hb_003581_160 Hb_005654_020--Hb_003581_160 Hb_005654_020--Hb_003438_060 Hb_005654_020--Hb_102129_010 Hb_005654_020--Hb_048476_160 Hb_000563_580 Hb_000563_580 Hb_005654_020--Hb_000563_580 Hb_102129_010--Hb_001147_090 Hb_102129_010--Hb_048476_160 Hb_102129_010--Hb_001147_080 Hb_158803_020 Hb_158803_020 Hb_102129_010--Hb_158803_020 Hb_010810_040 Hb_010810_040 Hb_102129_010--Hb_010810_040 Hb_001147_090--Hb_001147_080 Hb_001147_090--Hb_048476_160 Hb_001147_090--Hb_010810_040 Hb_000008_040 Hb_000008_040 Hb_001147_090--Hb_000008_040 Hb_002984_020 Hb_002984_020 Hb_001147_080--Hb_002984_020 Hb_001147_080--Hb_048476_160 Hb_001147_080--Hb_003438_060 Hb_000207_420 Hb_000207_420 Hb_001147_080--Hb_000207_420 Hb_003438_060--Hb_048476_160 Hb_003438_060--Hb_102129_010 Hb_000122_060 Hb_000122_060 Hb_003438_060--Hb_000122_060 Hb_048476_160--Hb_158803_020 Hb_000483_230 Hb_000483_230 Hb_048476_160--Hb_000483_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0532597 0 0.0854133 0.0582108 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis