Hb_005654_020

Information

Type -
Description -
Location Contig5654: 10633-15267
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa015000mg
description hypothetical protein
nr
ID XP_007200265.1
description hypothetical protein PRUPE_ppa015000mg [Prunus persica]
swissprot
ID P23074
description Pro-Pol polyprotein OS=Simian foamy virus type 1 GN=pol PE=1 SV=3
trembl
ID M5VK25
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa015000mg PE=4 SV=1
Gene Ontology
ID GO:0003676
description retrotransposon ty3-gypsy subclass

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005654_020 0.0 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
2 Hb_145708_010 0.1526817299 - - PREDICTED: transcription factor ILR3-like isoform X1 [Jatropha curcas]
3 Hb_003581_160 0.246312523 - - -
4 Hb_003438_060 0.2740449771 - - -
5 Hb_102129_010 0.3187055001 - - multicopper oxidase, putative [Ricinus communis]
6 Hb_048476_160 0.3256180994 - - hypothetical protein JCGZ_19593 [Jatropha curcas]
7 Hb_000563_580 0.3301768651 - - acyltransferase, putative [Ricinus communis]
8 Hb_000640_180 0.3309911748 - - enzyme inhibitor, putative [Ricinus communis]
9 Hb_002588_020 0.331018586 - - retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]
10 Hb_143629_160 0.3313287398 - - nitrate transporter, putative [Ricinus communis]
11 Hb_000046_530 0.3320797907 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
12 Hb_000122_060 0.3355439854 - - PREDICTED: protein LURP-one-related 14 [Jatropha curcas]
13 Hb_102748_010 0.3379123079 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
14 Hb_001491_060 0.3530370533 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like isoform X1 [Populus euphratica]
15 Hb_001147_090 0.3552181367 transcription factor TF Family: GRAS DELLA protein GAI1, putative [Ricinus communis]
16 Hb_137914_010 0.3606209879 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
17 Hb_002542_120 0.3647144473 transcription factor TF Family: C2H2 PREDICTED: protein indeterminate-domain 2-like [Jatropha curcas]
18 Hb_001147_080 0.3740421188 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_001862_080 0.3781175544 - - hypothetical protein RCOM_1154950 [Ricinus communis]
20 Hb_176082_010 0.3829952251 - - PREDICTED: pirin-like protein [Jatropha curcas]

Gene co-expression network

sample Hb_005654_020 Hb_005654_020 Hb_145708_010 Hb_145708_010 Hb_005654_020--Hb_145708_010 Hb_003581_160 Hb_003581_160 Hb_005654_020--Hb_003581_160 Hb_003438_060 Hb_003438_060 Hb_005654_020--Hb_003438_060 Hb_102129_010 Hb_102129_010 Hb_005654_020--Hb_102129_010 Hb_048476_160 Hb_048476_160 Hb_005654_020--Hb_048476_160 Hb_000563_580 Hb_000563_580 Hb_005654_020--Hb_000563_580 Hb_145708_010--Hb_102129_010 Hb_001147_090 Hb_001147_090 Hb_145708_010--Hb_001147_090 Hb_001147_080 Hb_001147_080 Hb_145708_010--Hb_001147_080 Hb_145708_010--Hb_003438_060 Hb_145708_010--Hb_048476_160 Hb_002588_020 Hb_002588_020 Hb_003581_160--Hb_002588_020 Hb_011468_010 Hb_011468_010 Hb_003581_160--Hb_011468_010 Hb_000046_230 Hb_000046_230 Hb_003581_160--Hb_000046_230 Hb_001491_060 Hb_001491_060 Hb_003581_160--Hb_001491_060 Hb_137914_010 Hb_137914_010 Hb_003581_160--Hb_137914_010 Hb_003438_060--Hb_048476_160 Hb_003438_060--Hb_001147_080 Hb_003438_060--Hb_102129_010 Hb_000122_060 Hb_000122_060 Hb_003438_060--Hb_000122_060 Hb_102129_010--Hb_001147_090 Hb_102129_010--Hb_048476_160 Hb_102129_010--Hb_001147_080 Hb_158803_020 Hb_158803_020 Hb_102129_010--Hb_158803_020 Hb_010810_040 Hb_010810_040 Hb_102129_010--Hb_010810_040 Hb_048476_160--Hb_158803_020 Hb_048476_160--Hb_001147_090 Hb_048476_160--Hb_001147_080 Hb_000483_230 Hb_000483_230 Hb_048476_160--Hb_000483_230 Hb_000640_180 Hb_000640_180 Hb_000563_580--Hb_000640_180 Hb_000046_530 Hb_000046_530 Hb_000563_580--Hb_000046_530 Hb_102748_010 Hb_102748_010 Hb_000563_580--Hb_102748_010 Hb_143629_160 Hb_143629_160 Hb_000563_580--Hb_143629_160 Hb_176082_010 Hb_176082_010 Hb_000563_580--Hb_176082_010 Hb_148777_020 Hb_148777_020 Hb_000563_580--Hb_148777_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00359394 0 0.00596636 0.00846825 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis