Hb_148777_020

Information

Type -
Description -
Location Contig148777: 4609-5642
Sequence    

Annotation

kegg
ID pvu:PHAVU_008G127000g
description hypothetical protein
nr
ID XP_011003371.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X1 [Populus euphratica]
swissprot
ID O81833
description G-type lectin S-receptor-like serine/threonine-protein kinase SD1-1 OS=Arabidopsis thaliana GN=SD11 PE=1 SV=1
trembl
ID A0A067JAQ2
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_21318 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase rks1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148777_020 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X1 [Populus euphratica]
2 Hb_003517_030 0.0235337428 - - PREDICTED: putative glycerol-3-phosphate transporter 5 isoform X2 [Eucalyptus grandis]
3 Hb_176082_010 0.0377783467 - - PREDICTED: pirin-like protein [Jatropha curcas]
4 Hb_012366_010 0.11491369 - - hypothetical protein JCGZ_01894 [Jatropha curcas]
5 Hb_089785_010 0.1230516535 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Fragaria vesca subsp. vesca]
6 Hb_102748_010 0.1618723616 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
7 Hb_000046_530 0.1929500288 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
8 Hb_000640_180 0.2009145497 - - enzyme inhibitor, putative [Ricinus communis]
9 Hb_001157_070 0.2066457818 - - -
10 Hb_000563_580 0.207898731 - - acyltransferase, putative [Ricinus communis]
11 Hb_000009_490 0.2116771733 - - hypothetical protein POPTR_0007s12040g [Populus trichocarpa]
12 Hb_000553_070 0.229081512 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Jatropha curcas]
13 Hb_004208_120 0.2754575098 - - PREDICTED: uncharacterized protein LOC104428079 [Eucalyptus grandis]
14 Hb_152640_010 0.2844136896 - - PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
15 Hb_000367_040 0.2891475694 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
16 Hb_143629_160 0.2940865089 - - nitrate transporter, putative [Ricinus communis]
17 Hb_001205_270 0.2957375822 - - PREDICTED: uncharacterized protein LOC105643859 [Jatropha curcas]
18 Hb_000679_160 0.2983681861 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
19 Hb_004531_180 0.3011134473 - - nitrate transporter, putative [Ricinus communis]
20 Hb_000702_050 0.3086837106 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_148777_020 Hb_148777_020 Hb_003517_030 Hb_003517_030 Hb_148777_020--Hb_003517_030 Hb_176082_010 Hb_176082_010 Hb_148777_020--Hb_176082_010 Hb_012366_010 Hb_012366_010 Hb_148777_020--Hb_012366_010 Hb_089785_010 Hb_089785_010 Hb_148777_020--Hb_089785_010 Hb_102748_010 Hb_102748_010 Hb_148777_020--Hb_102748_010 Hb_000046_530 Hb_000046_530 Hb_148777_020--Hb_000046_530 Hb_003517_030--Hb_176082_010 Hb_003517_030--Hb_012366_010 Hb_003517_030--Hb_089785_010 Hb_001157_070 Hb_001157_070 Hb_003517_030--Hb_001157_070 Hb_003517_030--Hb_102748_010 Hb_176082_010--Hb_102748_010 Hb_176082_010--Hb_012366_010 Hb_176082_010--Hb_000046_530 Hb_176082_010--Hb_089785_010 Hb_012366_010--Hb_089785_010 Hb_012366_010--Hb_001157_070 Hb_000009_490 Hb_000009_490 Hb_012366_010--Hb_000009_490 Hb_089785_010--Hb_001157_070 Hb_089785_010--Hb_000009_490 Hb_102748_010--Hb_000046_530 Hb_000640_180 Hb_000640_180 Hb_102748_010--Hb_000640_180 Hb_000563_580 Hb_000563_580 Hb_102748_010--Hb_000563_580 Hb_143629_160 Hb_143629_160 Hb_102748_010--Hb_143629_160 Hb_000046_530--Hb_000640_180 Hb_000046_530--Hb_000563_580 Hb_000046_530--Hb_143629_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.648213 0.278515 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis