Hb_012366_010

Information

Type -
Description -
Location Contig12366: 8734-11723
Sequence    

Annotation

kegg
ID rcu:RCOM_1360330
description calmodulin binding protein, putative
nr
ID KDP42106.1
description hypothetical protein JCGZ_01894 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0W1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01894 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012366_010 0.0 - - hypothetical protein JCGZ_01894 [Jatropha curcas]
2 Hb_089785_010 0.0082154575 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Fragaria vesca subsp. vesca]
3 Hb_003517_030 0.0915216397 - - PREDICTED: putative glycerol-3-phosphate transporter 5 isoform X2 [Eucalyptus grandis]
4 Hb_001157_070 0.0934385008 - - -
5 Hb_000009_490 0.09862511 - - hypothetical protein POPTR_0007s12040g [Populus trichocarpa]
6 Hb_148777_020 0.11491369 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X1 [Populus euphratica]
7 Hb_176082_010 0.1523443276 - - PREDICTED: pirin-like protein [Jatropha curcas]
8 Hb_000702_050 0.2004060957 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
9 Hb_000367_040 0.2151360572 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
10 Hb_004208_120 0.2154982919 - - PREDICTED: uncharacterized protein LOC104428079 [Eucalyptus grandis]
11 Hb_152640_010 0.2265666308 - - PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
12 Hb_001205_270 0.2470732132 - - PREDICTED: uncharacterized protein LOC105643859 [Jatropha curcas]
13 Hb_004531_180 0.2530160288 - - nitrate transporter, putative [Ricinus communis]
14 Hb_102748_010 0.2744755038 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
15 Hb_052640_010 0.2856895542 - - PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Jatropha curcas]
16 Hb_000553_070 0.2882087293 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Jatropha curcas]
17 Hb_017862_040 0.29932383 - - PREDICTED: pleiotropic drug resistance protein 3-like [Prunus mume]
18 Hb_000046_530 0.3049023943 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
19 Hb_002686_100 0.3052246981 - - -
20 Hb_050786_010 0.3069643902 - - hypothetical protein MIMGU_mgv1a014824mg [Erythranthe guttata]

Gene co-expression network

sample Hb_012366_010 Hb_012366_010 Hb_089785_010 Hb_089785_010 Hb_012366_010--Hb_089785_010 Hb_003517_030 Hb_003517_030 Hb_012366_010--Hb_003517_030 Hb_001157_070 Hb_001157_070 Hb_012366_010--Hb_001157_070 Hb_000009_490 Hb_000009_490 Hb_012366_010--Hb_000009_490 Hb_148777_020 Hb_148777_020 Hb_012366_010--Hb_148777_020 Hb_176082_010 Hb_176082_010 Hb_012366_010--Hb_176082_010 Hb_089785_010--Hb_001157_070 Hb_089785_010--Hb_000009_490 Hb_089785_010--Hb_003517_030 Hb_089785_010--Hb_148777_020 Hb_089785_010--Hb_176082_010 Hb_003517_030--Hb_148777_020 Hb_003517_030--Hb_176082_010 Hb_003517_030--Hb_001157_070 Hb_102748_010 Hb_102748_010 Hb_003517_030--Hb_102748_010 Hb_001157_070--Hb_000009_490 Hb_000702_050 Hb_000702_050 Hb_001157_070--Hb_000702_050 Hb_000367_040 Hb_000367_040 Hb_001157_070--Hb_000367_040 Hb_000009_490--Hb_000702_050 Hb_000009_490--Hb_000367_040 Hb_000009_490--Hb_003517_030 Hb_148777_020--Hb_176082_010 Hb_148777_020--Hb_102748_010 Hb_000046_530 Hb_000046_530 Hb_148777_020--Hb_000046_530 Hb_176082_010--Hb_102748_010 Hb_176082_010--Hb_000046_530
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0540934 0.0122751 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis