Hb_176082_010

Information

Type -
Description -
Location Contig176082: 684-1073
Sequence    

Annotation

kegg
ID pop:POPTR_0014s14780g
description POPTRDRAFT_572931; pirin-like family protein
nr
ID XP_012066253.1
description PREDICTED: pirin-like protein [Jatropha curcas]
swissprot
ID Q9LX45
description Putative pirin-like protein At3g59260 OS=Arabidopsis thaliana GN=At3g59260 PE=3 SV=1
trembl
ID A0A067L6M0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23820 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_176082_010 0.0 - - PREDICTED: pirin-like protein [Jatropha curcas]
2 Hb_148777_020 0.0377783467 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X1 [Populus euphratica]
3 Hb_003517_030 0.0612864877 - - PREDICTED: putative glycerol-3-phosphate transporter 5 isoform X2 [Eucalyptus grandis]
4 Hb_102748_010 0.124393018 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
5 Hb_012366_010 0.1523443276 - - hypothetical protein JCGZ_01894 [Jatropha curcas]
6 Hb_000046_530 0.1556075269 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
7 Hb_089785_010 0.1604336737 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Fragaria vesca subsp. vesca]
8 Hb_000640_180 0.1636107842 - - enzyme inhibitor, putative [Ricinus communis]
9 Hb_000563_580 0.1706301492 - - acyltransferase, putative [Ricinus communis]
10 Hb_000553_070 0.2187403976 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 isoform X2 [Jatropha curcas]
11 Hb_001157_070 0.2432901151 - - -
12 Hb_000009_490 0.2482613609 - - hypothetical protein POPTR_0007s12040g [Populus trichocarpa]
13 Hb_143629_160 0.2573447786 - - nitrate transporter, putative [Ricinus communis]
14 Hb_004208_120 0.301139007 - - PREDICTED: uncharacterized protein LOC104428079 [Eucalyptus grandis]
15 Hb_000679_160 0.3032392186 - - PREDICTED: probable carboxylesterase 17 [Jatropha curcas]
16 Hb_152640_010 0.3093584839 - - PREDICTED: disease resistance RPP13-like protein 4 [Populus euphratica]
17 Hb_000367_040 0.3176003326 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
18 Hb_001205_270 0.3181555339 - - PREDICTED: uncharacterized protein LOC105643859 [Jatropha curcas]
19 Hb_004531_180 0.323241167 - - nitrate transporter, putative [Ricinus communis]
20 Hb_052640_010 0.3358609288 - - PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_176082_010 Hb_176082_010 Hb_148777_020 Hb_148777_020 Hb_176082_010--Hb_148777_020 Hb_003517_030 Hb_003517_030 Hb_176082_010--Hb_003517_030 Hb_102748_010 Hb_102748_010 Hb_176082_010--Hb_102748_010 Hb_012366_010 Hb_012366_010 Hb_176082_010--Hb_012366_010 Hb_000046_530 Hb_000046_530 Hb_176082_010--Hb_000046_530 Hb_089785_010 Hb_089785_010 Hb_176082_010--Hb_089785_010 Hb_148777_020--Hb_003517_030 Hb_148777_020--Hb_012366_010 Hb_148777_020--Hb_089785_010 Hb_148777_020--Hb_102748_010 Hb_148777_020--Hb_000046_530 Hb_003517_030--Hb_012366_010 Hb_003517_030--Hb_089785_010 Hb_001157_070 Hb_001157_070 Hb_003517_030--Hb_001157_070 Hb_003517_030--Hb_102748_010 Hb_102748_010--Hb_000046_530 Hb_000640_180 Hb_000640_180 Hb_102748_010--Hb_000640_180 Hb_000563_580 Hb_000563_580 Hb_102748_010--Hb_000563_580 Hb_143629_160 Hb_143629_160 Hb_102748_010--Hb_143629_160 Hb_012366_010--Hb_089785_010 Hb_012366_010--Hb_001157_070 Hb_000009_490 Hb_000009_490 Hb_012366_010--Hb_000009_490 Hb_000046_530--Hb_000640_180 Hb_000046_530--Hb_000563_580 Hb_000046_530--Hb_143629_160 Hb_089785_010--Hb_001157_070 Hb_089785_010--Hb_000009_490
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.171834 0.0893388 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis