Hb_154430_010

Information

Type -
Description -
Location Contig154430: 450-938
Sequence    

Annotation

kegg
ID rcu:RCOM_0923940
description hypothetical protein
nr
ID XP_012076556.1
description PREDICTED: uncharacterized protein LOC105637632 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KF06
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07159 PE=4 SV=1
Gene Ontology
ID GO:0003712
description histone acetyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_154430_010 0.0 - - PREDICTED: uncharacterized protein LOC105637632 isoform X2 [Jatropha curcas]
2 Hb_003746_020 0.1900730778 - - PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic [Gossypium raimondii]
3 Hb_006970_010 0.1914544534 - - lipoxygenase, putative [Ricinus communis]
4 Hb_002200_100 0.1928016108 - - PREDICTED: pathogen-related protein-like [Jatropha curcas]
5 Hb_000710_160 0.215412981 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
6 Hb_009316_050 0.2172904467 - - PREDICTED: probable E3 ubiquitin-protein ligase RHA2B [Jatropha curcas]
7 Hb_079526_010 0.2203233117 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Populus euphratica]
8 Hb_027654_010 0.2233307011 - - Isoamyl acetate-hydrolyzing esterase, putative [Ricinus communis]
9 Hb_000172_620 0.2332365563 - - hypothetical protein VITISV_033646 [Vitis vinifera]
10 Hb_006922_070 0.2473804261 - - glutathione-s-transferase theta, gst, putative [Ricinus communis]
11 Hb_001699_020 0.2479140803 - - hypothetical protein L484_026849 [Morus notabilis]
12 Hb_003336_020 0.2511909675 - - PREDICTED: probable sodium/metabolite cotransporter BASS3, chloroplastic [Vitis vinifera]
13 Hb_000614_270 0.2541426063 - - -
14 Hb_030526_020 0.2543809028 - - PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Jatropha curcas]
15 Hb_000699_080 0.2575644215 - - PREDICTED: rubisco accumulation factor 1, chloroplastic [Jatropha curcas]
16 Hb_170878_020 0.2585266753 - - -
17 Hb_002686_060 0.2607982261 - - conserved hypothetical protein [Ricinus communis]
18 Hb_015817_010 0.2612644533 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
19 Hb_139365_010 0.2628282619 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 [Jatropha curcas]
20 Hb_004010_080 0.2661443869 - - alcohol dehydrogenase, putative [Ricinus communis]

Gene co-expression network

sample Hb_154430_010 Hb_154430_010 Hb_003746_020 Hb_003746_020 Hb_154430_010--Hb_003746_020 Hb_006970_010 Hb_006970_010 Hb_154430_010--Hb_006970_010 Hb_002200_100 Hb_002200_100 Hb_154430_010--Hb_002200_100 Hb_000710_160 Hb_000710_160 Hb_154430_010--Hb_000710_160 Hb_009316_050 Hb_009316_050 Hb_154430_010--Hb_009316_050 Hb_079526_010 Hb_079526_010 Hb_154430_010--Hb_079526_010 Hb_088080_030 Hb_088080_030 Hb_003746_020--Hb_088080_030 Hb_000920_020 Hb_000920_020 Hb_003746_020--Hb_000920_020 Hb_003746_020--Hb_000710_160 Hb_189099_020 Hb_189099_020 Hb_003746_020--Hb_189099_020 Hb_062192_060 Hb_062192_060 Hb_003746_020--Hb_062192_060 Hb_000914_190 Hb_000914_190 Hb_006970_010--Hb_000914_190 Hb_139365_010 Hb_139365_010 Hb_006970_010--Hb_139365_010 Hb_027654_010 Hb_027654_010 Hb_006970_010--Hb_027654_010 Hb_015817_010 Hb_015817_010 Hb_006970_010--Hb_015817_010 Hb_004242_200 Hb_004242_200 Hb_006970_010--Hb_004242_200 Hb_001699_020 Hb_001699_020 Hb_006970_010--Hb_001699_020 Hb_000668_210 Hb_000668_210 Hb_002200_100--Hb_000668_210 Hb_002200_100--Hb_003746_020 Hb_004010_080 Hb_004010_080 Hb_002200_100--Hb_004010_080 Hb_006111_040 Hb_006111_040 Hb_002200_100--Hb_006111_040 Hb_130507_020 Hb_130507_020 Hb_002200_100--Hb_130507_020 Hb_000710_160--Hb_062192_060 Hb_000710_160--Hb_088080_030 Hb_002686_060 Hb_002686_060 Hb_000710_160--Hb_002686_060 Hb_000699_080 Hb_000699_080 Hb_000710_160--Hb_000699_080 Hb_000710_160--Hb_000920_020 Hb_002170_080 Hb_002170_080 Hb_009316_050--Hb_002170_080 Hb_006922_070 Hb_006922_070 Hb_009316_050--Hb_006922_070 Hb_009316_050--Hb_027654_010 Hb_010381_080 Hb_010381_080 Hb_009316_050--Hb_010381_080 Hb_000907_130 Hb_000907_130 Hb_009316_050--Hb_000907_130 Hb_002835_050 Hb_002835_050 Hb_009316_050--Hb_002835_050 Hb_028960_010 Hb_028960_010 Hb_079526_010--Hb_028960_010 Hb_000359_070 Hb_000359_070 Hb_079526_010--Hb_000359_070 Hb_012940_020 Hb_012940_020 Hb_079526_010--Hb_012940_020 Hb_003336_020 Hb_003336_020 Hb_079526_010--Hb_003336_020 Hb_156850_020 Hb_156850_020 Hb_079526_010--Hb_156850_020 Hb_054865_040 Hb_054865_040 Hb_079526_010--Hb_054865_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.3726 0.148595 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.218771 0.184448 0.410138 2.23806

CAGE analysis