Hb_000668_210

Information

Type -
Description -
Location Contig668: 157320-157718
Sequence    

Annotation

kegg
ID pvu:PHAVU_006G031500g
description hypothetical protein
nr
ID XP_007146332.1
description hypothetical protein PHAVU_006G031500g [Phaseolus vulgaris]
swissprot
ID -
description -
trembl
ID V7BP17
description Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_006G031500g PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000668_210 0.0 - - hypothetical protein PHAVU_006G031500g [Phaseolus vulgaris]
2 Hb_130507_020 0.1068677602 - - -
3 Hb_002200_100 0.1474168387 - - PREDICTED: pathogen-related protein-like [Jatropha curcas]
4 Hb_001244_030 0.1842013147 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
5 Hb_002249_200 0.1846245559 transcription factor TF Family: LFY LEAFY-like protein [Pistacia chinensis]
6 Hb_007908_010 0.1864925052 - - -
7 Hb_025528_010 0.1871159166 - - PREDICTED: uncharacterized protein LOC102596706 [Solanum tuberosum]
8 Hb_028527_010 0.192179802 - - hypothetical protein CICLE_v10033628mg, partial [Citrus clementina]
9 Hb_005542_170 0.1996447234 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_000922_210 0.2019465404 - - PREDICTED: 50S ribosomal protein L12, chloroplastic [Jatropha curcas]
11 Hb_002217_290 0.2046827106 - - hypothetical protein JCGZ_19038 [Jatropha curcas]
12 Hb_012753_070 0.212878273 - - hypothetical protein VITISV_033646 [Vitis vinifera]
13 Hb_033095_050 0.22211836 - - hypothetical protein VITISV_038692 [Vitis vinifera]
14 Hb_024404_040 0.2445012818 - - hypothetical protein JCGZ_22351 [Jatropha curcas]
15 Hb_005031_010 0.2451456979 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
16 Hb_101624_010 0.2451852376 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
17 Hb_002232_420 0.2490819354 - - Palmitoyltransferase TIP1, putative [Ricinus communis]
18 Hb_000474_020 0.2562574961 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
19 Hb_003683_100 0.2564567667 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
20 Hb_007924_040 0.2565654844 - - PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Populus euphratica]

Gene co-expression network

sample Hb_000668_210 Hb_000668_210 Hb_130507_020 Hb_130507_020 Hb_000668_210--Hb_130507_020 Hb_002200_100 Hb_002200_100 Hb_000668_210--Hb_002200_100 Hb_001244_030 Hb_001244_030 Hb_000668_210--Hb_001244_030 Hb_002249_200 Hb_002249_200 Hb_000668_210--Hb_002249_200 Hb_007908_010 Hb_007908_010 Hb_000668_210--Hb_007908_010 Hb_025528_010 Hb_025528_010 Hb_000668_210--Hb_025528_010 Hb_024404_040 Hb_024404_040 Hb_130507_020--Hb_024404_040 Hb_130507_020--Hb_007908_010 Hb_001951_160 Hb_001951_160 Hb_130507_020--Hb_001951_160 Hb_000922_210 Hb_000922_210 Hb_130507_020--Hb_000922_210 Hb_002217_290 Hb_002217_290 Hb_130507_020--Hb_002217_290 Hb_154430_010 Hb_154430_010 Hb_002200_100--Hb_154430_010 Hb_003746_020 Hb_003746_020 Hb_002200_100--Hb_003746_020 Hb_004010_080 Hb_004010_080 Hb_002200_100--Hb_004010_080 Hb_006111_040 Hb_006111_040 Hb_002200_100--Hb_006111_040 Hb_002200_100--Hb_130507_020 Hb_028527_010 Hb_028527_010 Hb_001244_030--Hb_028527_010 Hb_001244_030--Hb_002249_200 Hb_001244_030--Hb_025528_010 Hb_005542_170 Hb_005542_170 Hb_001244_030--Hb_005542_170 Hb_033095_050 Hb_033095_050 Hb_001244_030--Hb_033095_050 Hb_000474_020 Hb_000474_020 Hb_001244_030--Hb_000474_020 Hb_002249_200--Hb_025528_010 Hb_002249_200--Hb_005542_170 Hb_002249_200--Hb_028527_010 Hb_002249_200--Hb_033095_050 Hb_005031_010 Hb_005031_010 Hb_002249_200--Hb_005031_010 Hb_007908_010--Hb_000474_020 Hb_003683_100 Hb_003683_100 Hb_007908_010--Hb_003683_100 Hb_007924_040 Hb_007924_040 Hb_007908_010--Hb_007924_040 Hb_001072_060 Hb_001072_060 Hb_007908_010--Hb_001072_060 Hb_035484_010 Hb_035484_010 Hb_007908_010--Hb_035484_010 Hb_025528_010--Hb_005542_170 Hb_025528_010--Hb_033095_050 Hb_025528_010--Hb_028527_010 Hb_025528_010--Hb_005031_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0715067 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.157283 0 0.0674258 0.828605

CAGE analysis