Hb_141132_010

Information

Type -
Description -
Location Contig141132: 886-1245
Sequence    

Annotation

kegg
ID rcu:RCOM_0569180
description Hsc70-interacting protein, putative
nr
ID XP_002530786.1
description Hsc70-interacting protein, putative [Ricinus communis]
swissprot
ID Q93YR3
description FAM10 family protein At4g22670 OS=Arabidopsis thaliana GN=At4g22670 PE=1 SV=1
trembl
ID B9SXR7
description Hsc70-interacting protein, putative OS=Ricinus communis GN=RCOM_0569180 PE=4 SV=1
Gene Ontology
ID GO:0005623
description tpr repeat-containing thioredoxin tdx

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_141132_010 0.0 - - Hsc70-interacting protein, putative [Ricinus communis]
2 Hb_003683_180 0.1431017111 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002498_050 0.1653172682 - - PREDICTED: aspartic proteinase-like [Jatropha curcas]
4 Hb_000212_320 0.1661051453 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
5 Hb_009119_040 0.1764576809 - - PREDICTED: tobamovirus multiplication protein 2A [Jatropha curcas]
6 Hb_028707_080 0.1774119488 - - plasma membrane aquaporin 1 [Hevea brasiliensis]
7 Hb_000130_190 0.1788539971 - - PREDICTED: uncharacterized protein LOC105638437 [Jatropha curcas]
8 Hb_006483_010 0.1848513252 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_002687_040 0.1850794326 - - PREDICTED: alpha-galactosidase 1-like [Jatropha curcas]
10 Hb_015026_060 0.185527534 - - PREDICTED: uncharacterized protein LOC105649473 [Jatropha curcas]
11 Hb_002110_040 0.1857350158 - - hypothetical protein AMTR_s00135p00074190 [Amborella trichopoda]
12 Hb_009851_050 0.1866014215 - - PREDICTED: nephrocystin-3 [Jatropha curcas]
13 Hb_026228_020 0.1868339593 - - PREDICTED: uncharacterized protein LOC105632747 [Jatropha curcas]
14 Hb_008103_040 0.1871852307 - - diacylglycerol O-acyltransferase 1 [Jatropha curcas]
15 Hb_000230_180 0.1883134208 - - prolyl 4-hydroxylase alpha subunit, putative [Ricinus communis]
16 Hb_000359_140 0.1895931183 - - PREDICTED: transmembrane protein 56-like [Jatropha curcas]
17 Hb_010254_020 0.1898345139 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
18 Hb_115107_010 0.195081525 - - Early-responsive to dehydration stress protein (ERD4) isoform 1 [Theobroma cacao]
19 Hb_005333_190 0.1968049035 - - PREDICTED: AP-4 complex subunit mu isoform X2 [Populus euphratica]
20 Hb_000991_070 0.2003355208 - - phytochrome A specific signal transduction component family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_141132_010 Hb_141132_010 Hb_003683_180 Hb_003683_180 Hb_141132_010--Hb_003683_180 Hb_002498_050 Hb_002498_050 Hb_141132_010--Hb_002498_050 Hb_000212_320 Hb_000212_320 Hb_141132_010--Hb_000212_320 Hb_009119_040 Hb_009119_040 Hb_141132_010--Hb_009119_040 Hb_028707_080 Hb_028707_080 Hb_141132_010--Hb_028707_080 Hb_000130_190 Hb_000130_190 Hb_141132_010--Hb_000130_190 Hb_002687_040 Hb_002687_040 Hb_003683_180--Hb_002687_040 Hb_005147_060 Hb_005147_060 Hb_003683_180--Hb_005147_060 Hb_008103_040 Hb_008103_040 Hb_003683_180--Hb_008103_040 Hb_004732_020 Hb_004732_020 Hb_003683_180--Hb_004732_020 Hb_003683_180--Hb_009119_040 Hb_000230_180 Hb_000230_180 Hb_002498_050--Hb_000230_180 Hb_002498_050--Hb_028707_080 Hb_002192_030 Hb_002192_030 Hb_002498_050--Hb_002192_030 Hb_009851_050 Hb_009851_050 Hb_002498_050--Hb_009851_050 Hb_000091_060 Hb_000091_060 Hb_002498_050--Hb_000091_060 Hb_000890_230 Hb_000890_230 Hb_002498_050--Hb_000890_230 Hb_000212_320--Hb_008103_040 Hb_000933_020 Hb_000933_020 Hb_000212_320--Hb_000933_020 Hb_007426_150 Hb_007426_150 Hb_000212_320--Hb_007426_150 Hb_000608_320 Hb_000608_320 Hb_000212_320--Hb_000608_320 Hb_132697_010 Hb_132697_010 Hb_000212_320--Hb_132697_010 Hb_001310_110 Hb_001310_110 Hb_000212_320--Hb_001310_110 Hb_005333_190 Hb_005333_190 Hb_009119_040--Hb_005333_190 Hb_002400_330 Hb_002400_330 Hb_009119_040--Hb_002400_330 Hb_028912_040 Hb_028912_040 Hb_009119_040--Hb_028912_040 Hb_051437_010 Hb_051437_010 Hb_009119_040--Hb_051437_010 Hb_181328_010 Hb_181328_010 Hb_009119_040--Hb_181328_010 Hb_009529_040 Hb_009529_040 Hb_009119_040--Hb_009529_040 Hb_028707_080--Hb_009851_050 Hb_004306_040 Hb_004306_040 Hb_028707_080--Hb_004306_040 Hb_028707_080--Hb_000230_180 Hb_001546_070 Hb_001546_070 Hb_028707_080--Hb_001546_070 Hb_000664_110 Hb_000664_110 Hb_028707_080--Hb_000664_110 Hb_009119_030 Hb_009119_030 Hb_000130_190--Hb_009119_030 Hb_000130_190--Hb_028707_080 Hb_004935_080 Hb_004935_080 Hb_000130_190--Hb_004935_080 Hb_002320_070 Hb_002320_070 Hb_000130_190--Hb_002320_070 Hb_008029_020 Hb_008029_020 Hb_000130_190--Hb_008029_020 Hb_019053_020 Hb_019053_020 Hb_000130_190--Hb_019053_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.4486 25.2271 10.5134 125.505 99.302 92.4231
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
23.0335 17.799 26.1559 29.467 12.2264

CAGE analysis