Hb_003683_180

Information

Type -
Description -
Location Contig3683: 217796-218212
Sequence    

Annotation

kegg
ID rcu:RCOM_1618720
description hypothetical protein
nr
ID XP_002512002.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RE63
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1618720 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003683_180 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002687_040 0.1063427616 - - PREDICTED: alpha-galactosidase 1-like [Jatropha curcas]
3 Hb_005147_060 0.1356653009 - - PREDICTED: shaggy-related protein kinase kappa [Populus euphratica]
4 Hb_141132_010 0.1431017111 - - Hsc70-interacting protein, putative [Ricinus communis]
5 Hb_008103_040 0.1516938812 - - diacylglycerol O-acyltransferase 1 [Jatropha curcas]
6 Hb_004732_020 0.153034978 - - PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1 [Populus euphratica]
7 Hb_009119_040 0.1560744566 - - PREDICTED: tobamovirus multiplication protein 2A [Jatropha curcas]
8 Hb_058643_010 0.1627529204 - - hydrolase, putative [Ricinus communis]
9 Hb_115107_010 0.1653910053 - - Early-responsive to dehydration stress protein (ERD4) isoform 1 [Theobroma cacao]
10 Hb_000212_320 0.1656807264 - - PREDICTED: uncharacterized protein LOC105644891 [Jatropha curcas]
11 Hb_000705_120 0.1697342539 - - glycosyltransferase, putative [Ricinus communis]
12 Hb_025814_010 0.1704303301 - - hypothetical protein PRUPE_ppa015585mg [Prunus persica]
13 Hb_001247_170 0.1749297908 - - PREDICTED: probable receptor-like protein kinase At5g18500 [Jatropha curcas]
14 Hb_009529_040 0.1783652649 - - PREDICTED: transmembrane protein 120 homolog isoform X1 [Malus domestica]
15 Hb_001476_140 0.1808734667 - - PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
16 Hb_008096_030 0.1816970495 - - PREDICTED: uncharacterized protein LOC105638438 [Jatropha curcas]
17 Hb_174541_020 0.1847256207 - - PREDICTED: cysteine proteinase inhibitor 6-like [Populus euphratica]
18 Hb_168973_010 0.1858327286 - - -
19 Hb_005511_060 0.186245863 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007192_080 0.186331255 - - PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003683_180 Hb_003683_180 Hb_002687_040 Hb_002687_040 Hb_003683_180--Hb_002687_040 Hb_005147_060 Hb_005147_060 Hb_003683_180--Hb_005147_060 Hb_141132_010 Hb_141132_010 Hb_003683_180--Hb_141132_010 Hb_008103_040 Hb_008103_040 Hb_003683_180--Hb_008103_040 Hb_004732_020 Hb_004732_020 Hb_003683_180--Hb_004732_020 Hb_009119_040 Hb_009119_040 Hb_003683_180--Hb_009119_040 Hb_001247_170 Hb_001247_170 Hb_002687_040--Hb_001247_170 Hb_095831_010 Hb_095831_010 Hb_002687_040--Hb_095831_010 Hb_015026_060 Hb_015026_060 Hb_002687_040--Hb_015026_060 Hb_002687_040--Hb_005147_060 Hb_025814_010 Hb_025814_010 Hb_002687_040--Hb_025814_010 Hb_005147_060--Hb_004732_020 Hb_005147_060--Hb_008103_040 Hb_005211_100 Hb_005211_100 Hb_005147_060--Hb_005211_100 Hb_004659_020 Hb_004659_020 Hb_005147_060--Hb_004659_020 Hb_058643_010 Hb_058643_010 Hb_005147_060--Hb_058643_010 Hb_001691_120 Hb_001691_120 Hb_005147_060--Hb_001691_120 Hb_002498_050 Hb_002498_050 Hb_141132_010--Hb_002498_050 Hb_000212_320 Hb_000212_320 Hb_141132_010--Hb_000212_320 Hb_141132_010--Hb_009119_040 Hb_028707_080 Hb_028707_080 Hb_141132_010--Hb_028707_080 Hb_000130_190 Hb_000130_190 Hb_141132_010--Hb_000130_190 Hb_001541_090 Hb_001541_090 Hb_008103_040--Hb_001541_090 Hb_009529_030 Hb_009529_030 Hb_008103_040--Hb_009529_030 Hb_001341_120 Hb_001341_120 Hb_008103_040--Hb_001341_120 Hb_007426_150 Hb_007426_150 Hb_008103_040--Hb_007426_150 Hb_008103_040--Hb_000212_320 Hb_004732_020--Hb_005211_100 Hb_003777_310 Hb_003777_310 Hb_004732_020--Hb_003777_310 Hb_023001_060 Hb_023001_060 Hb_004732_020--Hb_023001_060 Hb_004732_020--Hb_001691_120 Hb_007192_080 Hb_007192_080 Hb_004732_020--Hb_007192_080 Hb_005333_190 Hb_005333_190 Hb_009119_040--Hb_005333_190 Hb_002400_330 Hb_002400_330 Hb_009119_040--Hb_002400_330 Hb_028912_040 Hb_028912_040 Hb_009119_040--Hb_028912_040 Hb_051437_010 Hb_051437_010 Hb_009119_040--Hb_051437_010 Hb_181328_010 Hb_181328_010 Hb_009119_040--Hb_181328_010 Hb_009529_040 Hb_009529_040 Hb_009119_040--Hb_009529_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.23831 0.397489 0.519194 3.89752 4.71514 4.66977
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.10525 0.868118 2.11027 1.90749 1.03108

CAGE analysis