Hb_058643_010

Information

Type -
Description -
Location Contig58643: 22-285
Sequence    

Annotation

kegg
ID rcu:RCOM_0585540
description hydrolase, putative (EC:3.1.3.2)
nr
ID XP_002522966.1
description hydrolase, putative [Ricinus communis]
swissprot
ID Q9LJU7
description Purple acid phosphatase 18 OS=Arabidopsis thaliana GN=PAP18 PE=2 SV=1
trembl
ID B9SAE7
description Purple acid phosphatase OS=Ricinus communis GN=RCOM_0585540 PE=3 SV=1
Gene Ontology
ID GO:0003993
description purple acid phosphatase 18

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_058643_010 0.0 - - hydrolase, putative [Ricinus communis]
2 Hb_005211_100 0.0914176275 - - PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform [Jatropha curcas]
3 Hb_003988_010 0.0973090214 - - PREDICTED: vacuolar-sorting receptor 3 [Jatropha curcas]
4 Hb_005147_060 0.1047892264 - - PREDICTED: shaggy-related protein kinase kappa [Populus euphratica]
5 Hb_001675_070 0.1059687482 - - eukaryotic translation elongation factor, putative [Ricinus communis]
6 Hb_011310_160 0.1111831734 - - PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
7 Hb_001357_270 0.1120976971 - - PREDICTED: aspartic proteinase A1-like [Jatropha curcas]
8 Hb_000613_080 0.1142175018 - - PREDICTED: mucin-5AC-like [Nicotiana sylvestris]
9 Hb_000343_190 0.1147987034 - - PREDICTED: coatomer subunit beta'-2 isoform X1 [Jatropha curcas]
10 Hb_004732_020 0.1151131095 - - PREDICTED: chitobiosyldiphosphodolichol beta-mannosyltransferase isoform X1 [Populus euphratica]
11 Hb_025477_040 0.1190519587 - - PREDICTED: post-GPI attachment to proteins factor 3 [Jatropha curcas]
12 Hb_021297_050 0.1193083898 - - PREDICTED: signal recognition particle receptor subunit alpha [Jatropha curcas]
13 Hb_008103_040 0.1212826766 - - diacylglycerol O-acyltransferase 1 [Jatropha curcas]
14 Hb_001860_040 0.1216450995 - - PREDICTED: cleavage stimulation factor subunit 77 isoform X4 [Jatropha curcas]
15 Hb_002811_060 0.12232964 - - PREDICTED: protein transport protein Sec24-like At4g32640 [Jatropha curcas]
16 Hb_002053_080 0.1223362428 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21300 [Jatropha curcas]
17 Hb_000021_030 0.1233554585 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
18 Hb_011716_020 0.1245111757 - - PREDICTED: uncharacterized protein LOC105637783 [Jatropha curcas]
19 Hb_000920_210 0.1250698692 - - PREDICTED: uridine 5'-monophosphate synthase [Jatropha curcas]
20 Hb_000116_500 0.1268395614 - - PREDICTED: trafficking protein particle complex subunit 11 [Jatropha curcas]

Gene co-expression network

sample Hb_058643_010 Hb_058643_010 Hb_005211_100 Hb_005211_100 Hb_058643_010--Hb_005211_100 Hb_003988_010 Hb_003988_010 Hb_058643_010--Hb_003988_010 Hb_005147_060 Hb_005147_060 Hb_058643_010--Hb_005147_060 Hb_001675_070 Hb_001675_070 Hb_058643_010--Hb_001675_070 Hb_011310_160 Hb_011310_160 Hb_058643_010--Hb_011310_160 Hb_001357_270 Hb_001357_270 Hb_058643_010--Hb_001357_270 Hb_002783_240 Hb_002783_240 Hb_005211_100--Hb_002783_240 Hb_103012_010 Hb_103012_010 Hb_005211_100--Hb_103012_010 Hb_000116_500 Hb_000116_500 Hb_005211_100--Hb_000116_500 Hb_001488_410 Hb_001488_410 Hb_005211_100--Hb_001488_410 Hb_000608_320 Hb_000608_320 Hb_005211_100--Hb_000608_320 Hb_004102_140 Hb_004102_140 Hb_005211_100--Hb_004102_140 Hb_010417_050 Hb_010417_050 Hb_003988_010--Hb_010417_050 Hb_002811_060 Hb_002811_060 Hb_003988_010--Hb_002811_060 Hb_003988_010--Hb_000116_500 Hb_003605_110 Hb_003605_110 Hb_003988_010--Hb_003605_110 Hb_004228_010 Hb_004228_010 Hb_003988_010--Hb_004228_010 Hb_002053_080 Hb_002053_080 Hb_003988_010--Hb_002053_080 Hb_004732_020 Hb_004732_020 Hb_005147_060--Hb_004732_020 Hb_008103_040 Hb_008103_040 Hb_005147_060--Hb_008103_040 Hb_005147_060--Hb_005211_100 Hb_004659_020 Hb_004659_020 Hb_005147_060--Hb_004659_020 Hb_001691_120 Hb_001691_120 Hb_005147_060--Hb_001691_120 Hb_000209_070 Hb_000209_070 Hb_001675_070--Hb_000209_070 Hb_001541_080 Hb_001541_080 Hb_001675_070--Hb_001541_080 Hb_001143_110 Hb_001143_110 Hb_001675_070--Hb_001143_110 Hb_003464_020 Hb_003464_020 Hb_001675_070--Hb_003464_020 Hb_011716_020 Hb_011716_020 Hb_001675_070--Hb_011716_020 Hb_000347_130 Hb_000347_130 Hb_001675_070--Hb_000347_130 Hb_000398_120 Hb_000398_120 Hb_011310_160--Hb_000398_120 Hb_006660_010 Hb_006660_010 Hb_011310_160--Hb_006660_010 Hb_011310_160--Hb_003988_010 Hb_025477_040 Hb_025477_040 Hb_011310_160--Hb_025477_040 Hb_010174_040 Hb_010174_040 Hb_011310_160--Hb_010174_040 Hb_002974_060 Hb_002974_060 Hb_011310_160--Hb_002974_060 Hb_002454_020 Hb_002454_020 Hb_001357_270--Hb_002454_020 Hb_000739_220 Hb_000739_220 Hb_001357_270--Hb_000739_220 Hb_000600_070 Hb_000600_070 Hb_001357_270--Hb_000600_070 Hb_000613_080 Hb_000613_080 Hb_001357_270--Hb_000613_080 Hb_000544_050 Hb_000544_050 Hb_001357_270--Hb_000544_050 Hb_000158_100 Hb_000158_100 Hb_001357_270--Hb_000158_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
32.0323 37.1665 21.6501 55.9329 108.879 92.6713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.4583 18.8737 50.3633 73.1835 34.5456

CAGE analysis