Hb_139139_010

Information

Type desease resistance
Description Gene Name: NB-ARC
Location Contig139139: 2-481
Sequence    

Annotation

kegg
ID rcu:RCOM_1482450
description hypothetical protein
nr
ID XP_002524239.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9SX38
description Putative disease resistance protein At1g50180 OS=Arabidopsis thaliana GN=At1g50180 PE=3 SV=2
trembl
ID B9SE20
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1482450 PE=4 SV=1
Gene Ontology
ID GO:0043531
description nbs-lrr resistance partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_139139_010 0.0 desease resistance Gene Name: NB-ARC conserved hypothetical protein [Ricinus communis]
2 Hb_003449_030 0.1878596335 - - PREDICTED: 5'-adenylylsulfate reductase 3, chloroplastic-like [Camelina sativa]
3 Hb_000692_030 0.1895155969 - - nucleoredoxin, putative [Ricinus communis]
4 Hb_042491_010 0.1939836095 - - JHL06P13.14 [Jatropha curcas]
5 Hb_000189_070 0.1995264238 transcription factor TF Family: AUX/IAA Auxin-induced protein 22D, putative [Ricinus communis]
6 Hb_005695_020 0.2058156454 - - PREDICTED: low affinity sulfate transporter 3 [Jatropha curcas]
7 Hb_002035_020 0.2170986913 transcription factor TF Family: TRAF hypothetical protein B456_011G050200 [Gossypium raimondii]
8 Hb_032050_070 0.2199043076 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
9 Hb_006550_010 0.2200642886 - - PREDICTED: vacuolar amino acid transporter 1 [Eucalyptus grandis]
10 Hb_036176_010 0.2216313871 - - hypothetical protein CISIN_1g002055mg [Citrus sinensis]
11 Hb_002035_030 0.2255730089 - - hypothetical protein PRUPE_ppa003221mg [Prunus persica]
12 Hb_000172_050 0.2267844269 - - PREDICTED: uncharacterized protein LOC105650611 [Jatropha curcas]
13 Hb_001277_420 0.2278443328 - - PREDICTED: protein lin-12-like isoform X2 [Populus euphratica]
14 Hb_020967_010 0.2302349441 - - -
15 Hb_000062_490 0.2304066912 - - PREDICTED: lipoxygenase 6, chloroplastic [Jatropha curcas]
16 Hb_120117_010 0.230610192 - - Disease resistance protein RFL1, putative [Ricinus communis]
17 Hb_003216_020 0.2317977869 transcription factor TF Family: Orphans PREDICTED: histidine kinase 2 [Jatropha curcas]
18 Hb_004453_180 0.2329826853 - - hypothetical protein JCGZ_07188 [Jatropha curcas]
19 Hb_000853_100 0.2355095159 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF073 [Jatropha curcas]
20 Hb_007313_050 0.2361242702 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_139139_010 Hb_139139_010 Hb_003449_030 Hb_003449_030 Hb_139139_010--Hb_003449_030 Hb_000692_030 Hb_000692_030 Hb_139139_010--Hb_000692_030 Hb_042491_010 Hb_042491_010 Hb_139139_010--Hb_042491_010 Hb_000189_070 Hb_000189_070 Hb_139139_010--Hb_000189_070 Hb_005695_020 Hb_005695_020 Hb_139139_010--Hb_005695_020 Hb_002035_020 Hb_002035_020 Hb_139139_010--Hb_002035_020 Hb_017857_010 Hb_017857_010 Hb_003449_030--Hb_017857_010 Hb_006615_160 Hb_006615_160 Hb_003449_030--Hb_006615_160 Hb_000567_350 Hb_000567_350 Hb_003449_030--Hb_000567_350 Hb_012743_010 Hb_012743_010 Hb_003449_030--Hb_012743_010 Hb_000062_490 Hb_000062_490 Hb_003449_030--Hb_000062_490 Hb_032050_070 Hb_032050_070 Hb_003449_030--Hb_032050_070 Hb_000692_030--Hb_000062_490 Hb_000692_030--Hb_042491_010 Hb_001277_420 Hb_001277_420 Hb_000692_030--Hb_001277_420 Hb_012727_010 Hb_012727_010 Hb_000692_030--Hb_012727_010 Hb_028841_010 Hb_028841_010 Hb_000692_030--Hb_028841_010 Hb_003579_040 Hb_003579_040 Hb_000692_030--Hb_003579_040 Hb_036176_010 Hb_036176_010 Hb_042491_010--Hb_036176_010 Hb_038718_010 Hb_038718_010 Hb_042491_010--Hb_038718_010 Hb_004218_220 Hb_004218_220 Hb_042491_010--Hb_004218_220 Hb_042491_010--Hb_000189_070 Hb_011206_050 Hb_011206_050 Hb_042491_010--Hb_011206_050 Hb_033053_020 Hb_033053_020 Hb_042491_010--Hb_033053_020 Hb_003647_040 Hb_003647_040 Hb_000189_070--Hb_003647_040 Hb_000189_070--Hb_033053_020 Hb_000189_070--Hb_012727_010 Hb_000189_070--Hb_036176_010 Hb_000189_070--Hb_032050_070 Hb_005695_020--Hb_001277_420 Hb_002053_090 Hb_002053_090 Hb_005695_020--Hb_002053_090 Hb_010381_110 Hb_010381_110 Hb_005695_020--Hb_010381_110 Hb_004032_250 Hb_004032_250 Hb_005695_020--Hb_004032_250 Hb_000692_230 Hb_000692_230 Hb_005695_020--Hb_000692_230 Hb_064047_010 Hb_064047_010 Hb_005695_020--Hb_064047_010 Hb_002035_020--Hb_038718_010 Hb_048937_010 Hb_048937_010 Hb_002035_020--Hb_048937_010 Hb_000128_090 Hb_000128_090 Hb_002035_020--Hb_000128_090 Hb_004096_140 Hb_004096_140 Hb_002035_020--Hb_004096_140 Hb_001019_140 Hb_001019_140 Hb_002035_020--Hb_001019_140 Hb_001213_080 Hb_001213_080 Hb_002035_020--Hb_001213_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.279688 4.40495 1.45369 5.22517 0.177003 0.110165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.947511 1.50717 0

CAGE analysis