Hb_111881_030

Information

Type -
Description -
Location Contig111881: 50724-52798
Sequence    

Annotation

kegg
ID rcu:RCOM_0769470
description glycosyltransferase, putative
nr
ID XP_012086203.1
description PREDICTED: uncharacterized protein LOC105645255 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID E6NU96
description JHL06B08.8 protein OS=Jatropha curcas GN=JHL06B08.8 PE=4 SV=1
Gene Ontology
ID GO:0016757
description glycosyltransferase ago61

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_03593: 50421-50715 , PASA_asmbl_03594: 50895-51593 , PASA_asmbl_03595: 51648-51772
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_111881_030 0.0 - - PREDICTED: uncharacterized protein LOC105645255 [Jatropha curcas]
2 Hb_001956_190 0.0965601073 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
3 Hb_000003_430 0.1230045937 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Jatropha curcas]
4 Hb_000003_760 0.1352287612 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA26-like [Jatropha curcas]
5 Hb_000506_130 0.1517504682 - - DGCR14-related family protein [Populus trichocarpa]
6 Hb_052113_020 0.1678029205 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
7 Hb_008725_190 0.1749862156 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 5-like [Jatropha curcas]
8 Hb_012760_060 0.1754669015 - - PREDICTED: uncharacterized protein LOC105647085 isoform X1 [Jatropha curcas]
9 Hb_000270_770 0.1771555995 - - PREDICTED: uncharacterized protein LOC105640410 [Jatropha curcas]
10 Hb_000336_190 0.1786455388 - - PREDICTED: UPF0481 protein At3g47200-like [Gossypium raimondii]
11 Hb_011416_020 0.1797674861 - - conserved hypothetical protein [Ricinus communis]
12 Hb_009421_050 0.1835816644 - - PREDICTED: uncharacterized protein LOC105647037 [Jatropha curcas]
13 Hb_004143_050 0.1853892435 - - PREDICTED: uncharacterized protein LOC105630712 [Jatropha curcas]
14 Hb_187697_010 0.1910140749 - - TMV resistance protein N, putative [Ricinus communis]
15 Hb_007304_100 0.1963692681 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Jatropha curcas]
16 Hb_017434_020 0.201619778 transcription factor TF Family: C2H2 Zinc finger protein 4 [Populus trichocarpa]
17 Hb_000245_270 0.2017347131 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
18 Hb_004968_050 0.202412875 - - PREDICTED: putative lipid-transfer protein DIR1 [Jatropha curcas]
19 Hb_125884_010 0.2056831369 - - PREDICTED: metalloendoproteinase 1-like [Jatropha curcas]
20 Hb_003913_030 0.2058333974 - - PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]

Gene co-expression network

sample Hb_111881_030 Hb_111881_030 Hb_001956_190 Hb_001956_190 Hb_111881_030--Hb_001956_190 Hb_000003_430 Hb_000003_430 Hb_111881_030--Hb_000003_430 Hb_000003_760 Hb_000003_760 Hb_111881_030--Hb_000003_760 Hb_000506_130 Hb_000506_130 Hb_111881_030--Hb_000506_130 Hb_052113_020 Hb_052113_020 Hb_111881_030--Hb_052113_020 Hb_008725_190 Hb_008725_190 Hb_111881_030--Hb_008725_190 Hb_001956_190--Hb_000003_430 Hb_001956_190--Hb_000506_130 Hb_000270_770 Hb_000270_770 Hb_001956_190--Hb_000270_770 Hb_000336_190 Hb_000336_190 Hb_001956_190--Hb_000336_190 Hb_001956_190--Hb_000003_760 Hb_000003_430--Hb_000270_770 Hb_011120_020 Hb_011120_020 Hb_000003_430--Hb_011120_020 Hb_187697_010 Hb_187697_010 Hb_000003_430--Hb_187697_010 Hb_011416_020 Hb_011416_020 Hb_000003_430--Hb_011416_020 Hb_001787_070 Hb_001787_070 Hb_000003_760--Hb_001787_070 Hb_000003_760--Hb_000336_190 Hb_009557_050 Hb_009557_050 Hb_000003_760--Hb_009557_050 Hb_178658_010 Hb_178658_010 Hb_000003_760--Hb_178658_010 Hb_000245_270 Hb_000245_270 Hb_000506_130--Hb_000245_270 Hb_000506_140 Hb_000506_140 Hb_000506_130--Hb_000506_140 Hb_000506_130--Hb_052113_020 Hb_017434_020 Hb_017434_020 Hb_000506_130--Hb_017434_020 Hb_029238_020 Hb_029238_020 Hb_000506_130--Hb_029238_020 Hb_004143_050 Hb_004143_050 Hb_000506_130--Hb_004143_050 Hb_052113_020--Hb_000245_270 Hb_002042_190 Hb_002042_190 Hb_052113_020--Hb_002042_190 Hb_003800_010 Hb_003800_010 Hb_052113_020--Hb_003800_010 Hb_052113_020--Hb_029238_020 Hb_052113_020--Hb_004143_050 Hb_008725_190--Hb_003800_010 Hb_001227_010 Hb_001227_010 Hb_008725_190--Hb_001227_010 Hb_007304_100 Hb_007304_100 Hb_008725_190--Hb_007304_100 Hb_131957_010 Hb_131957_010 Hb_008725_190--Hb_131957_010 Hb_043115_010 Hb_043115_010 Hb_008725_190--Hb_043115_010 Hb_000661_010 Hb_000661_010 Hb_008725_190--Hb_000661_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.339 45.1609 2.08016 27.0818 0.608995 1.30565
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.45059 2.66785 1.81648 1.91303 2.25846

CAGE analysis