Hb_178658_010

Information

Type -
Description -
Location Contig178658: 10077-10760
Sequence    

Annotation

kegg
ID rcu:RCOM_1279070
description hypothetical protein
nr
ID XP_012081309.1
description PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K1M3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18613 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_178658_010 0.0 - - PREDICTED: uncharacterized protein LOC105641396 [Jatropha curcas]
2 Hb_002311_110 0.1181366663 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000336_190 0.120373801 - - PREDICTED: UPF0481 protein At3g47200-like [Gossypium raimondii]
4 Hb_000836_210 0.1220426552 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
5 Hb_002849_110 0.1268822162 - - hypothetical protein JCGZ_14362 [Jatropha curcas]
6 Hb_007382_100 0.1300630647 - - receptor serine-threonine protein kinase, putative [Ricinus communis]
7 Hb_000087_100 0.1335021461 - - PREDICTED: cellulose synthase-like protein D3 [Jatropha curcas]
8 Hb_001318_140 0.1351539047 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
9 Hb_012787_040 0.1366477386 - - PREDICTED: uncharacterized protein LOC105649794 isoform X2 [Jatropha curcas]
10 Hb_009421_050 0.1383129788 - - PREDICTED: uncharacterized protein LOC105647037 [Jatropha curcas]
11 Hb_000805_040 0.1428796313 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
12 Hb_000776_050 0.1431662314 - - Alpha-1,4-glucan-protein synthase [UDP-forming], putative [Ricinus communis]
13 Hb_000003_760 0.1456973722 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA26-like [Jatropha curcas]
14 Hb_001472_140 0.1458999616 - - PREDICTED: BTB/POZ domain-containing protein At5g41330 [Jatropha curcas]
15 Hb_098160_010 0.1459898001 desease resistance Gene Name: TIR PREDICTED: TMV resistance protein N-like isoform X2 [Jatropha curcas]
16 Hb_001329_080 0.1478869535 - - PREDICTED: probable protein phosphatase 2C 49 [Jatropha curcas]
17 Hb_005714_100 0.148783498 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance RPP13-like protein 1 [Vitis vinifera]
18 Hb_000172_080 0.1507208084 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Jatropha curcas]
19 Hb_001541_160 0.1516393581 - - PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Jatropha curcas]
20 Hb_000373_250 0.1523388213 - - PREDICTED: uncharacterized protein LOC105640939 [Jatropha curcas]

Gene co-expression network

sample Hb_178658_010 Hb_178658_010 Hb_002311_110 Hb_002311_110 Hb_178658_010--Hb_002311_110 Hb_000336_190 Hb_000336_190 Hb_178658_010--Hb_000336_190 Hb_000836_210 Hb_000836_210 Hb_178658_010--Hb_000836_210 Hb_002849_110 Hb_002849_110 Hb_178658_010--Hb_002849_110 Hb_007382_100 Hb_007382_100 Hb_178658_010--Hb_007382_100 Hb_000087_100 Hb_000087_100 Hb_178658_010--Hb_000087_100 Hb_002311_110--Hb_000836_210 Hb_002004_010 Hb_002004_010 Hb_002311_110--Hb_002004_010 Hb_002311_110--Hb_002849_110 Hb_000666_120 Hb_000666_120 Hb_002311_110--Hb_000666_120 Hb_005656_160 Hb_005656_160 Hb_002311_110--Hb_005656_160 Hb_000336_190--Hb_000836_210 Hb_000003_760 Hb_000003_760 Hb_000336_190--Hb_000003_760 Hb_002875_070 Hb_002875_070 Hb_000336_190--Hb_002875_070 Hb_000336_190--Hb_002849_110 Hb_001472_140 Hb_001472_140 Hb_000336_190--Hb_001472_140 Hb_000836_210--Hb_002849_110 Hb_000836_210--Hb_001472_140 Hb_000836_210--Hb_000087_100 Hb_001541_160 Hb_001541_160 Hb_000836_210--Hb_001541_160 Hb_001405_060 Hb_001405_060 Hb_002849_110--Hb_001405_060 Hb_005282_010 Hb_005282_010 Hb_002849_110--Hb_005282_010 Hb_000373_250 Hb_000373_250 Hb_002849_110--Hb_000373_250 Hb_002849_110--Hb_000087_100 Hb_004282_040 Hb_004282_040 Hb_002849_110--Hb_004282_040 Hb_001318_140 Hb_001318_140 Hb_007382_100--Hb_001318_140 Hb_007382_100--Hb_000087_100 Hb_001329_080 Hb_001329_080 Hb_007382_100--Hb_001329_080 Hb_001619_160 Hb_001619_160 Hb_007382_100--Hb_001619_160 Hb_001898_130 Hb_001898_130 Hb_007382_100--Hb_001898_130 Hb_003430_070 Hb_003430_070 Hb_007382_100--Hb_003430_070 Hb_000087_100--Hb_001318_140 Hb_001226_170 Hb_001226_170 Hb_000087_100--Hb_001226_170 Hb_012787_040 Hb_012787_040 Hb_000087_100--Hb_012787_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.50767 63.7602 18.7795 35.4684 2.30775 4.01224
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.76034 6.24053 1.16899 6.12693 12.1769

CAGE analysis