Hb_077562_020

Information

Type -
Description -
Location Contig77562: 16516-21341
Sequence    

Annotation

kegg
ID rcu:RCOM_0621360
description Protein regulator of cytokinesis, putative
nr
ID XP_012068728.1
description PREDICTED: 65-kDa microtubule-associated protein 5 [Jatropha curcas]
swissprot
ID Q9ZVJ3
description 65-kDa microtubule-associated protein 5 OS=Arabidopsis thaliana GN=MAP65-5 PE=1 SV=2
trembl
ID A0A067KWM9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24571 PE=4 SV=1
Gene Ontology
ID GO:0008017
description 65-kda microtubule-associated protein 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57769: 18461-19038 , PASA_asmbl_57770: 19045-19493 , PASA_asmbl_57771: 19735-20414
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_077562_020 0.0 - - PREDICTED: 65-kDa microtubule-associated protein 5 [Jatropha curcas]
2 Hb_001366_380 0.1232146722 - - PREDICTED: pectin acetylesterase 6-like isoform X2 [Jatropha curcas]
3 Hb_000260_670 0.123919635 - - PREDICTED: serine/threonine-protein kinase TIO isoform X1 [Jatropha curcas]
4 Hb_000272_010 0.1328669369 - - PREDICTED: DNA replication licensing factor MCM5 [Jatropha curcas]
5 Hb_005183_150 0.1351932584 - - PREDICTED: protein CYPRO4 [Jatropha curcas]
6 Hb_000954_040 0.1354921145 - - PREDICTED: metal tolerance protein 4 [Jatropha curcas]
7 Hb_000958_040 0.1463968927 - - PREDICTED: DNA topoisomerase 2 [Jatropha curcas]
8 Hb_011861_040 0.1484245863 - - PREDICTED: pheromone-processing carboxypeptidase KEX1-like [Jatropha curcas]
9 Hb_020301_020 0.155034079 - - calmodulin binding protein, putative [Ricinus communis]
10 Hb_001076_010 0.1555064501 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
11 Hb_007632_210 0.159292163 - - PREDICTED: sodium/potassium/calcium exchanger 1 [Populus euphratica]
12 Hb_000030_080 0.161079551 - - PREDICTED: uncharacterized protein LOC105632640 [Jatropha curcas]
13 Hb_003360_010 0.1620897026 - - Bipolar kinesin KRP-130, putative [Ricinus communis]
14 Hb_001263_030 0.1661368323 - - PREDICTED: uncharacterized protein At3g28850-like [Jatropha curcas]
15 Hb_001369_550 0.1672232164 - - 21 kDa protein precursor, putative [Ricinus communis]
16 Hb_001649_050 0.1674145127 - - Shaggy-like kinase 13 isoform 1 [Theobroma cacao]
17 Hb_002081_190 0.1677667069 - - hypothetical protein EUGRSUZ_I010391, partial [Eucalyptus grandis]
18 Hb_006316_090 0.1688013314 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
19 Hb_001454_270 0.1696198314 - - PREDICTED: condensin-2 complex subunit D3 isoform X2 [Jatropha curcas]
20 Hb_080147_070 0.1705497514 - - Rop5 [Hevea brasiliensis]

Gene co-expression network

sample Hb_077562_020 Hb_077562_020 Hb_001366_380 Hb_001366_380 Hb_077562_020--Hb_001366_380 Hb_000260_670 Hb_000260_670 Hb_077562_020--Hb_000260_670 Hb_000272_010 Hb_000272_010 Hb_077562_020--Hb_000272_010 Hb_005183_150 Hb_005183_150 Hb_077562_020--Hb_005183_150 Hb_000954_040 Hb_000954_040 Hb_077562_020--Hb_000954_040 Hb_000958_040 Hb_000958_040 Hb_077562_020--Hb_000958_040 Hb_001366_380--Hb_000272_010 Hb_001366_380--Hb_000260_670 Hb_006316_090 Hb_006316_090 Hb_001366_380--Hb_006316_090 Hb_005306_030 Hb_005306_030 Hb_001366_380--Hb_005306_030 Hb_001649_050 Hb_001649_050 Hb_001366_380--Hb_001649_050 Hb_001076_010 Hb_001076_010 Hb_001366_380--Hb_001076_010 Hb_080147_070 Hb_080147_070 Hb_000260_670--Hb_080147_070 Hb_000260_670--Hb_000954_040 Hb_000260_670--Hb_000272_010 Hb_003360_010 Hb_003360_010 Hb_000260_670--Hb_003360_010 Hb_002700_030 Hb_002700_030 Hb_000260_670--Hb_002700_030 Hb_000272_010--Hb_080147_070 Hb_000535_040 Hb_000535_040 Hb_000272_010--Hb_000535_040 Hb_000343_220 Hb_000343_220 Hb_000272_010--Hb_000343_220 Hb_006711_040 Hb_006711_040 Hb_000272_010--Hb_006711_040 Hb_007632_210 Hb_007632_210 Hb_005183_150--Hb_007632_210 Hb_033041_010 Hb_033041_010 Hb_005183_150--Hb_033041_010 Hb_005183_150--Hb_003360_010 Hb_001524_120 Hb_001524_120 Hb_005183_150--Hb_001524_120 Hb_007632_080 Hb_007632_080 Hb_005183_150--Hb_007632_080 Hb_124677_050 Hb_124677_050 Hb_005183_150--Hb_124677_050 Hb_011861_040 Hb_011861_040 Hb_000954_040--Hb_011861_040 Hb_001369_550 Hb_001369_550 Hb_000954_040--Hb_001369_550 Hb_000954_040--Hb_080147_070 Hb_000954_040--Hb_002700_030 Hb_001999_160 Hb_001999_160 Hb_000954_040--Hb_001999_160 Hb_000958_040--Hb_000954_040 Hb_007163_030 Hb_007163_030 Hb_000958_040--Hb_007163_030 Hb_000958_040--Hb_011861_040 Hb_001328_070 Hb_001328_070 Hb_000958_040--Hb_001328_070 Hb_000958_040--Hb_001366_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0107286 0.0478821 2.23385 1.21224 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0383884 0.10898 0.894068 0.121432

CAGE analysis