Hb_074419_010

Information

Type -
Description -
Location Contig74419: 206-848
Sequence    

Annotation

kegg
ID rcu:RCOM_0866940
description hypothetical protein
nr
ID XP_012076489.1
description PREDICTED: uncharacterized protein LOC105637596 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KBF8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07127 PE=4 SV=1
Gene Ontology
ID GO:0005886
description PREDICTED: uncharacterized protein LOC105637596

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_074419_010 0.0 - - PREDICTED: uncharacterized protein LOC105637596 [Jatropha curcas]
2 Hb_001025_100 0.1241700375 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
3 Hb_006351_030 0.1364394359 - - PREDICTED: E3 ubiquitin-protein ligase MARCH8-like [Jatropha curcas]
4 Hb_030685_010 0.1400122904 - - -
5 Hb_008026_010 0.1521634158 - - PREDICTED: xyloglucan endotransglucosylase/hydrolase protein 9 [Jatropha curcas]
6 Hb_000093_090 0.173143016 - - PREDICTED: UDP-arabinopyranose mutase 3 [Populus euphratica]
7 Hb_001782_100 0.1749356165 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]
8 Hb_005916_040 0.1805014944 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
9 Hb_002003_090 0.1836466906 - - PREDICTED: TPR repeat-containing protein ZIP4 isoform X1 [Jatropha curcas]
10 Hb_000098_270 0.1860461035 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
11 Hb_002749_040 0.1889848559 - - Ribosomal protein L6 family protein [Theobroma cacao]
12 Hb_004884_170 0.1891742995 - - hypothetical protein AALP_AA1G067000 [Arabis alpina]
13 Hb_001141_440 0.1895608519 - - PREDICTED: uncharacterized protein LOC105631977 [Jatropha curcas]
14 Hb_107658_010 0.1911492837 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X2 [Jatropha curcas]
15 Hb_000878_120 0.1913570451 - - PREDICTED: protein downstream neighbor of Son [Jatropha curcas]
16 Hb_003055_080 0.1956834849 - - PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Jatropha curcas]
17 Hb_000162_190 0.1960278415 - - PREDICTED: thaumatin-like protein 1b [Jatropha curcas]
18 Hb_000805_270 0.1987112082 - - PREDICTED: expansin-A4 [Gossypium raimondii]
19 Hb_003540_120 0.1993863639 - - calmodulin binding protein, putative [Ricinus communis]
20 Hb_007590_110 0.2000398361 - - PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Jatropha curcas]

Gene co-expression network

sample Hb_074419_010 Hb_074419_010 Hb_001025_100 Hb_001025_100 Hb_074419_010--Hb_001025_100 Hb_006351_030 Hb_006351_030 Hb_074419_010--Hb_006351_030 Hb_030685_010 Hb_030685_010 Hb_074419_010--Hb_030685_010 Hb_008026_010 Hb_008026_010 Hb_074419_010--Hb_008026_010 Hb_000093_090 Hb_000093_090 Hb_074419_010--Hb_000093_090 Hb_001782_100 Hb_001782_100 Hb_074419_010--Hb_001782_100 Hb_001025_100--Hb_006351_030 Hb_002304_100 Hb_002304_100 Hb_001025_100--Hb_002304_100 Hb_000339_050 Hb_000339_050 Hb_001025_100--Hb_000339_050 Hb_000805_270 Hb_000805_270 Hb_001025_100--Hb_000805_270 Hb_005916_040 Hb_005916_040 Hb_001025_100--Hb_005916_040 Hb_000162_190 Hb_000162_190 Hb_001025_100--Hb_000162_190 Hb_006351_030--Hb_001782_100 Hb_000098_270 Hb_000098_270 Hb_006351_030--Hb_000098_270 Hb_000152_590 Hb_000152_590 Hb_006351_030--Hb_000152_590 Hb_000878_120 Hb_000878_120 Hb_006351_030--Hb_000878_120 Hb_006916_120 Hb_006916_120 Hb_006351_030--Hb_006916_120 Hb_003540_120 Hb_003540_120 Hb_030685_010--Hb_003540_120 Hb_030685_010--Hb_000093_090 Hb_003728_110 Hb_003728_110 Hb_030685_010--Hb_003728_110 Hb_001188_050 Hb_001188_050 Hb_030685_010--Hb_001188_050 Hb_003055_080 Hb_003055_080 Hb_030685_010--Hb_003055_080 Hb_002749_040 Hb_002749_040 Hb_030685_010--Hb_002749_040 Hb_005618_130 Hb_005618_130 Hb_008026_010--Hb_005618_130 Hb_008026_010--Hb_030685_010 Hb_005215_060 Hb_005215_060 Hb_008026_010--Hb_005215_060 Hb_000363_260 Hb_000363_260 Hb_008026_010--Hb_000363_260 Hb_002681_120 Hb_002681_120 Hb_008026_010--Hb_002681_120 Hb_002292_080 Hb_002292_080 Hb_000093_090--Hb_002292_080 Hb_000093_090--Hb_000162_190 Hb_000853_250 Hb_000853_250 Hb_000093_090--Hb_000853_250 Hb_003935_040 Hb_003935_040 Hb_000093_090--Hb_003935_040 Hb_001141_440 Hb_001141_440 Hb_000093_090--Hb_001141_440 Hb_001782_100--Hb_000152_590 Hb_007590_110 Hb_007590_110 Hb_001782_100--Hb_007590_110 Hb_024682_030 Hb_024682_030 Hb_001782_100--Hb_024682_030 Hb_010672_010 Hb_010672_010 Hb_001782_100--Hb_010672_010 Hb_000535_040 Hb_000535_040 Hb_001782_100--Hb_000535_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.26346 2.86673 16.8739 30.8417 0.747349 1.37319
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 6.49759 2.08773

CAGE analysis