Hb_031266_030

Information

Type -
Description -
Location Contig31266: 26473-32659
Sequence    

Annotation

kegg
ID tcc:TCM_018449
description Kinase superfamily protein isoform 1
nr
ID XP_007032484.1
description Kinase superfamily protein isoform 1 [Theobroma cacao]
swissprot
ID Q9LFP7
description Probable receptor-like protein kinase At5g15080 OS=Arabidopsis thaliana GN=At5g15080 PE=2 SV=1
trembl
ID A0A061EEI5
description Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_018449 PE=3 SV=1
Gene Ontology
ID GO:0005622
description probable receptor-like protein kinase at5g15080

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_33108: 26357-30725
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_031266_030 0.0 - - Kinase superfamily protein isoform 1 [Theobroma cacao]
2 Hb_012753_150 0.1112018545 transcription factor TF Family: GRAS DELLA protein RGL1, putative [Ricinus communis]
3 Hb_003599_060 0.1156313082 - - calmodulin binding protein, putative [Ricinus communis]
4 Hb_006060_010 0.1458050482 - - PREDICTED: cyclin-A2-2-like [Jatropha curcas]
5 Hb_014497_070 0.1479690101 - - PREDICTED: cyclin-dependent kinase B2-2 [Jatropha curcas]
6 Hb_003878_060 0.1494618473 - - hypothetical protein B456_007G326900, partial [Gossypium raimondii]
7 Hb_000388_040 0.1499494835 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
8 Hb_024714_090 0.1535595807 rubber biosynthesis Gene Name: SRPP3 PREDICTED: stress-related protein [Jatropha curcas]
9 Hb_000956_050 0.1566238151 transcription factor TF Family: bHLH PREDICTED: transcription factor SPATULA-like isoform X1 [Jatropha curcas]
10 Hb_000142_030 0.1578311653 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
11 Hb_001541_190 0.1614500271 - - PREDICTED: uncharacterized protein LOC105644700 [Jatropha curcas]
12 Hb_000028_250 0.1617349464 - - PREDICTED: nudix hydrolase 4 [Jatropha curcas]
13 Hb_007545_110 0.1642330828 - - catalytic, putative [Ricinus communis]
14 Hb_001761_010 0.1647163784 - - PREDICTED: uncharacterized protein LOC105639282 [Jatropha curcas]
15 Hb_001755_040 0.1657290003 - - PREDICTED: cyclin-A2-4-like isoform X1 [Jatropha curcas]
16 Hb_033152_060 0.1681525574 - - PREDICTED: phragmoplast orienting kinesin 2 [Jatropha curcas]
17 Hb_002200_020 0.1691544539 transcription factor TF Family: C2C2-Dof hypothetical protein RCOM_0137680 [Ricinus communis]
18 Hb_000027_160 0.1697218637 - - PREDICTED: probable protein phosphatase 2C 15 isoform X3 [Jatropha curcas]
19 Hb_000020_080 0.1698836577 transcription factor TF Family: MYB hypothetical protein JCGZ_09080 [Jatropha curcas]
20 Hb_010267_020 0.1700999888 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]

Gene co-expression network

sample Hb_031266_030 Hb_031266_030 Hb_012753_150 Hb_012753_150 Hb_031266_030--Hb_012753_150 Hb_003599_060 Hb_003599_060 Hb_031266_030--Hb_003599_060 Hb_006060_010 Hb_006060_010 Hb_031266_030--Hb_006060_010 Hb_014497_070 Hb_014497_070 Hb_031266_030--Hb_014497_070 Hb_003878_060 Hb_003878_060 Hb_031266_030--Hb_003878_060 Hb_000388_040 Hb_000388_040 Hb_031266_030--Hb_000388_040 Hb_001761_010 Hb_001761_010 Hb_012753_150--Hb_001761_010 Hb_012753_150--Hb_006060_010 Hb_012753_150--Hb_000388_040 Hb_005568_140 Hb_005568_140 Hb_012753_150--Hb_005568_140 Hb_004109_100 Hb_004109_100 Hb_012753_150--Hb_004109_100 Hb_010267_020 Hb_010267_020 Hb_012753_150--Hb_010267_020 Hb_000142_030 Hb_000142_030 Hb_003599_060--Hb_000142_030 Hb_003599_060--Hb_012753_150 Hb_003599_060--Hb_014497_070 Hb_003599_060--Hb_006060_010 Hb_003599_060--Hb_003878_060 Hb_000260_610 Hb_000260_610 Hb_006060_010--Hb_000260_610 Hb_006060_010--Hb_003878_060 Hb_000960_120 Hb_000960_120 Hb_006060_010--Hb_000960_120 Hb_003119_040 Hb_003119_040 Hb_006060_010--Hb_003119_040 Hb_013344_010 Hb_013344_010 Hb_006060_010--Hb_013344_010 Hb_010705_040 Hb_010705_040 Hb_014497_070--Hb_010705_040 Hb_011360_130 Hb_011360_130 Hb_014497_070--Hb_011360_130 Hb_001755_040 Hb_001755_040 Hb_014497_070--Hb_001755_040 Hb_002205_180 Hb_002205_180 Hb_014497_070--Hb_002205_180 Hb_002232_310 Hb_002232_310 Hb_014497_070--Hb_002232_310 Hb_000441_210 Hb_000441_210 Hb_014497_070--Hb_000441_210 Hb_003878_060--Hb_014497_070 Hb_006289_020 Hb_006289_020 Hb_003878_060--Hb_006289_020 Hb_003878_060--Hb_012753_150 Hb_007474_020 Hb_007474_020 Hb_003878_060--Hb_007474_020 Hb_003767_030 Hb_003767_030 Hb_000388_040--Hb_003767_030 Hb_000349_170 Hb_000349_170 Hb_000388_040--Hb_000349_170 Hb_002218_050 Hb_002218_050 Hb_000388_040--Hb_002218_050 Hb_000388_040--Hb_010267_020 Hb_007441_290 Hb_007441_290 Hb_000388_040--Hb_007441_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.155409 0.981487 6.32773 2.23168 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.161346 0.126933 0.238218 0.243297 0.530461

CAGE analysis