Hb_027760_080

Information

Type -
Description -
Location Contig27760: 77022-78756
Sequence    

Annotation

kegg
ID rcu:RCOM_0837520
description cytochrome P450, putative (EC:1.14.14.1)
nr
ID XP_002522465.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9C788
description Cytochrome P450 704B1 OS=Arabidopsis thaliana GN=CYP704B1 PE=2 SV=1
trembl
ID B9S8Z6
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0837520 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 704b1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28999: 77557-77803
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_027760_080 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_000640_310 0.0626887643 - - hypothetical protein JCGZ_14055 [Jatropha curcas]
3 Hb_001799_050 0.0676658632 - - PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera]
4 Hb_008887_020 0.0680189792 - - PREDICTED: uncharacterized protein LOC105636191 [Jatropha curcas]
5 Hb_000092_020 0.0680825989 transcription factor TF Family: MYB transcription factor, putative [Ricinus communis]
6 Hb_022256_060 0.0682634823 - - PREDICTED: uncharacterized protein LOC105628137 [Jatropha curcas]
7 Hb_001143_250 0.0700739657 - - PREDICTED: SWI/SNF complex subunit SWI3C isoform X1 [Jatropha curcas]
8 Hb_000264_030 0.0713831868 - - PREDICTED: splicing factor 3B subunit 2 [Jatropha curcas]
9 Hb_001227_030 0.0723505866 - - PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1 [Jatropha curcas]
10 Hb_001638_270 0.0726287162 - - PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X2 [Jatropha curcas]
11 Hb_000487_420 0.0733028099 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At1g04390 [Jatropha curcas]
12 Hb_002835_230 0.0756510525 - - leucine-rich repeat-containing protein, putative [Ricinus communis]
13 Hb_000190_120 0.0763189183 - - PREDICTED: uncharacterized protein LOC105649936 [Jatropha curcas]
14 Hb_000926_190 0.0765209504 - - PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
15 Hb_000160_350 0.0768255591 - - PREDICTED: double-stranded RNA-binding protein 4 isoform X3 [Vitis vinifera]
16 Hb_008103_070 0.0776371634 transcription factor TF Family: MYB-related PREDICTED: telomere repeat-binding factor 4-like [Jatropha curcas]
17 Hb_144831_010 0.0783707257 transcription factor TF Family: MYB transcription factor, putative [Ricinus communis]
18 Hb_000334_270 0.0790554035 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
19 Hb_003785_040 0.0796473048 - - PREDICTED: R3H domain-containing protein 2-like isoform X1 [Jatropha curcas]
20 Hb_000395_130 0.0802528292 - - PREDICTED: N6-adenosine-methyltransferase MT-A70-like [Jatropha curcas]

Gene co-expression network

sample Hb_027760_080 Hb_027760_080 Hb_000640_310 Hb_000640_310 Hb_027760_080--Hb_000640_310 Hb_001799_050 Hb_001799_050 Hb_027760_080--Hb_001799_050 Hb_008887_020 Hb_008887_020 Hb_027760_080--Hb_008887_020 Hb_000092_020 Hb_000092_020 Hb_027760_080--Hb_000092_020 Hb_022256_060 Hb_022256_060 Hb_027760_080--Hb_022256_060 Hb_001143_250 Hb_001143_250 Hb_027760_080--Hb_001143_250 Hb_000640_310--Hb_001799_050 Hb_000556_170 Hb_000556_170 Hb_000640_310--Hb_000556_170 Hb_000236_470 Hb_000236_470 Hb_000640_310--Hb_000236_470 Hb_000191_130 Hb_000191_130 Hb_000640_310--Hb_000191_130 Hb_000160_350 Hb_000160_350 Hb_000640_310--Hb_000160_350 Hb_023344_010 Hb_023344_010 Hb_000640_310--Hb_023344_010 Hb_003633_070 Hb_003633_070 Hb_001799_050--Hb_003633_070 Hb_000264_030 Hb_000264_030 Hb_001799_050--Hb_000264_030 Hb_001799_050--Hb_000556_170 Hb_001799_050--Hb_000160_350 Hb_001799_050--Hb_001143_250 Hb_008887_020--Hb_022256_060 Hb_000679_340 Hb_000679_340 Hb_008887_020--Hb_000679_340 Hb_005332_020 Hb_005332_020 Hb_008887_020--Hb_005332_020 Hb_000914_120 Hb_000914_120 Hb_008887_020--Hb_000914_120 Hb_000230_090 Hb_000230_090 Hb_008887_020--Hb_000230_090 Hb_000395_130 Hb_000395_130 Hb_000092_020--Hb_000395_130 Hb_001080_230 Hb_001080_230 Hb_000092_020--Hb_001080_230 Hb_000003_190 Hb_000003_190 Hb_000092_020--Hb_000003_190 Hb_003785_040 Hb_003785_040 Hb_000092_020--Hb_003785_040 Hb_000574_540 Hb_000574_540 Hb_000092_020--Hb_000574_540 Hb_011491_010 Hb_011491_010 Hb_000092_020--Hb_011491_010 Hb_022256_060--Hb_000679_340 Hb_008695_110 Hb_008695_110 Hb_022256_060--Hb_008695_110 Hb_022256_060--Hb_000230_090 Hb_022256_060--Hb_000160_350 Hb_001821_160 Hb_001821_160 Hb_022256_060--Hb_001821_160 Hb_000418_140 Hb_000418_140 Hb_001143_250--Hb_000418_140 Hb_001143_250--Hb_003633_070 Hb_002022_070 Hb_002022_070 Hb_001143_250--Hb_002022_070 Hb_007307_020 Hb_007307_020 Hb_001143_250--Hb_007307_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.6299 1.68127 1.06104 0.698391 1.8008 1.41068
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.20306 1.00209 0.676875 1.12399 1.15908

CAGE analysis