Hb_011645_030

Information

Type -
Description -
Location Contig11645: 47021-49203
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011645_030 0.0 - - -
2 Hb_001450_100 0.2509493643 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
3 Hb_138462_010 0.2548813501 - - PREDICTED: SUMO-conjugating enzyme UBC9-A-like isoform X1 [Elaeis guineensis]
4 Hb_005488_110 0.2568293193 - - PREDICTED: cytochrome P450 89A2-like [Populus euphratica]
5 Hb_001983_010 0.2581152392 - - -
6 Hb_000683_090 0.2867906906 - - stress enhanced protein [Medicago truncatula]
7 Hb_002687_040 0.29849168 - - PREDICTED: alpha-galactosidase 1-like [Jatropha curcas]
8 Hb_141296_010 0.2991724685 - - -
9 Hb_019053_010 0.2999479147 - - -
10 Hb_009119_020 0.300084563 - - hypothetical protein CISIN_1g033708mg [Citrus sinensis]
11 Hb_000522_140 0.30632705 - - protein transporter, putative [Ricinus communis]
12 Hb_088428_010 0.3084220642 - - PREDICTED: E3 ubiquitin-protein ligase RNF181 homolog [Jatropha curcas]
13 Hb_006960_010 0.3134884617 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003683_180 0.3136992345 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001369_380 0.3143526433 - - F-box family protein, putative [Theobroma cacao]
16 Hb_151463_010 0.3164999013 - - hypothetical protein B456_004G013100 [Gossypium raimondii]
17 Hb_001222_040 0.3170069423 - - -
18 Hb_000133_070 0.3186641637 - - -
19 Hb_005333_190 0.3192516415 - - PREDICTED: AP-4 complex subunit mu isoform X2 [Populus euphratica]
20 Hb_141132_010 0.319878466 - - Hsc70-interacting protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_011645_030 Hb_011645_030 Hb_001450_100 Hb_001450_100 Hb_011645_030--Hb_001450_100 Hb_138462_010 Hb_138462_010 Hb_011645_030--Hb_138462_010 Hb_005488_110 Hb_005488_110 Hb_011645_030--Hb_005488_110 Hb_001983_010 Hb_001983_010 Hb_011645_030--Hb_001983_010 Hb_000683_090 Hb_000683_090 Hb_011645_030--Hb_000683_090 Hb_002687_040 Hb_002687_040 Hb_011645_030--Hb_002687_040 Hb_000215_260 Hb_000215_260 Hb_001450_100--Hb_000215_260 Hb_001450_100--Hb_001983_010 Hb_077211_010 Hb_077211_010 Hb_001450_100--Hb_077211_010 Hb_012725_100 Hb_012725_100 Hb_001450_100--Hb_012725_100 Hb_000099_210 Hb_000099_210 Hb_001450_100--Hb_000099_210 Hb_088428_010 Hb_088428_010 Hb_001450_100--Hb_088428_010 Hb_141296_010 Hb_141296_010 Hb_138462_010--Hb_141296_010 Hb_002611_030 Hb_002611_030 Hb_138462_010--Hb_002611_030 Hb_017014_010 Hb_017014_010 Hb_138462_010--Hb_017014_010 Hb_060458_010 Hb_060458_010 Hb_138462_010--Hb_060458_010 Hb_001711_050 Hb_001711_050 Hb_138462_010--Hb_001711_050 Hb_007527_070 Hb_007527_070 Hb_138462_010--Hb_007527_070 Hb_000101_160 Hb_000101_160 Hb_005488_110--Hb_000101_160 Hb_000857_050 Hb_000857_050 Hb_005488_110--Hb_000857_050 Hb_001369_380 Hb_001369_380 Hb_005488_110--Hb_001369_380 Hb_005488_110--Hb_002687_040 Hb_090497_010 Hb_090497_010 Hb_005488_110--Hb_090497_010 Hb_001983_010--Hb_012725_100 Hb_010317_030 Hb_010317_030 Hb_001983_010--Hb_010317_030 Hb_024272_010 Hb_024272_010 Hb_001983_010--Hb_024272_010 Hb_001983_010--Hb_077211_010 Hb_007447_020 Hb_007447_020 Hb_000683_090--Hb_007447_020 Hb_005318_020 Hb_005318_020 Hb_000683_090--Hb_005318_020 Hb_008096_020 Hb_008096_020 Hb_000683_090--Hb_008096_020 Hb_031866_050 Hb_031866_050 Hb_000683_090--Hb_031866_050 Hb_001222_040 Hb_001222_040 Hb_000683_090--Hb_001222_040 Hb_169170_010 Hb_169170_010 Hb_000683_090--Hb_169170_010 Hb_003683_180 Hb_003683_180 Hb_002687_040--Hb_003683_180 Hb_001247_170 Hb_001247_170 Hb_002687_040--Hb_001247_170 Hb_095831_010 Hb_095831_010 Hb_002687_040--Hb_095831_010 Hb_015026_060 Hb_015026_060 Hb_002687_040--Hb_015026_060 Hb_005147_060 Hb_005147_060 Hb_002687_040--Hb_005147_060 Hb_025814_010 Hb_025814_010 Hb_002687_040--Hb_025814_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.460561 0 0.409129 2.73946 1.49186 3.19246
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.821905 0.932747 0

CAGE analysis