Hb_011472_030

Information

Type -
Description -
Location Contig11472: 39014-44833
Sequence    

Annotation

kegg
ID pop:POPTR_0016s12220g
description POPTRDRAFT_825335; kinase family protein
nr
ID XP_012087882.1
description PREDICTED: putative serine/threonine-protein kinase [Jatropha curcas]
swissprot
ID C0LGH2
description Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=2 SV=2
trembl
ID A0A067JWS4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25029 PE=3 SV=1
Gene Ontology
ID GO:0004674
description serine threonine-protein kinase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011472_030 0.0 - - PREDICTED: putative serine/threonine-protein kinase [Jatropha curcas]
2 Hb_000156_110 0.0830603463 - - Uncharacterized protein TCM_029490 [Theobroma cacao]
3 Hb_029695_090 0.083947962 - - PREDICTED: probable inactive patatin-like protein 9 [Jatropha curcas]
4 Hb_004635_120 0.0861706848 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
5 Hb_000020_090 0.0978693112 - - hypothetical protein JCGZ_09084 [Jatropha curcas]
6 Hb_002066_110 0.0998069483 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
7 Hb_003873_020 0.1015943393 - - PREDICTED: root phototropism protein 2 [Jatropha curcas]
8 Hb_001750_020 0.1036159837 - - PREDICTED: MATE efflux family protein 6-like isoform X1 [Jatropha curcas]
9 Hb_002702_010 0.1062616014 - - carbohydrate binding protein, putative [Ricinus communis]
10 Hb_001638_200 0.1071070439 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 43 [Jatropha curcas]
11 Hb_000302_360 0.1072349025 - - beta-carotene hydroxylase, putative [Ricinus communis]
12 Hb_002818_150 0.1117392543 transcription factor TF Family: MYB hypothetical protein POPTR_0014s10680g [Populus trichocarpa]
13 Hb_000680_170 0.1119765517 - - hypothetical protein JCGZ_24789 [Jatropha curcas]
14 Hb_084303_010 0.1133184084 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001080_190 0.1140153681 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
16 Hb_002609_120 0.115199181 - - hypothetical protein POPTR_0001s25660g [Populus trichocarpa]
17 Hb_017434_010 0.1154981327 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
18 Hb_032920_020 0.1157277611 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
19 Hb_004223_150 0.1176497534 - - PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Jatropha curcas]
20 Hb_014720_140 0.1182336476 - - PREDICTED: uncharacterized protein LOC105640367 [Jatropha curcas]

Gene co-expression network

sample Hb_011472_030 Hb_011472_030 Hb_000156_110 Hb_000156_110 Hb_011472_030--Hb_000156_110 Hb_029695_090 Hb_029695_090 Hb_011472_030--Hb_029695_090 Hb_004635_120 Hb_004635_120 Hb_011472_030--Hb_004635_120 Hb_000020_090 Hb_000020_090 Hb_011472_030--Hb_000020_090 Hb_002066_110 Hb_002066_110 Hb_011472_030--Hb_002066_110 Hb_003873_020 Hb_003873_020 Hb_011472_030--Hb_003873_020 Hb_002835_310 Hb_002835_310 Hb_000156_110--Hb_002835_310 Hb_000156_110--Hb_004635_120 Hb_002609_120 Hb_002609_120 Hb_000156_110--Hb_002609_120 Hb_001638_200 Hb_001638_200 Hb_000156_110--Hb_001638_200 Hb_032920_020 Hb_032920_020 Hb_000156_110--Hb_032920_020 Hb_000000_390 Hb_000000_390 Hb_000156_110--Hb_000000_390 Hb_000413_050 Hb_000413_050 Hb_029695_090--Hb_000413_050 Hb_004223_150 Hb_004223_150 Hb_029695_090--Hb_004223_150 Hb_000007_330 Hb_000007_330 Hb_029695_090--Hb_000007_330 Hb_012395_090 Hb_012395_090 Hb_029695_090--Hb_012395_090 Hb_000881_020 Hb_000881_020 Hb_029695_090--Hb_000881_020 Hb_004635_120--Hb_001638_200 Hb_012395_240 Hb_012395_240 Hb_004635_120--Hb_012395_240 Hb_000538_090 Hb_000538_090 Hb_004635_120--Hb_000538_090 Hb_004635_120--Hb_000000_390 Hb_004635_120--Hb_032920_020 Hb_002702_010 Hb_002702_010 Hb_000020_090--Hb_002702_010 Hb_004102_060 Hb_004102_060 Hb_000020_090--Hb_004102_060 Hb_000020_090--Hb_012395_090 Hb_000020_090--Hb_000156_110 Hb_000020_090--Hb_004635_120 Hb_002818_150 Hb_002818_150 Hb_000020_090--Hb_002818_150 Hb_002150_090 Hb_002150_090 Hb_002066_110--Hb_002150_090 Hb_001674_010 Hb_001674_010 Hb_002066_110--Hb_001674_010 Hb_001095_020 Hb_001095_020 Hb_002066_110--Hb_001095_020 Hb_008054_030 Hb_008054_030 Hb_002066_110--Hb_008054_030 Hb_003339_010 Hb_003339_010 Hb_002066_110--Hb_003339_010 Hb_000617_360 Hb_000617_360 Hb_002066_110--Hb_000617_360 Hb_007270_020 Hb_007270_020 Hb_003873_020--Hb_007270_020 Hb_000718_060 Hb_000718_060 Hb_003873_020--Hb_000718_060 Hb_009393_090 Hb_009393_090 Hb_003873_020--Hb_009393_090 Hb_001750_020 Hb_001750_020 Hb_003873_020--Hb_001750_020 Hb_039075_020 Hb_039075_020 Hb_003873_020--Hb_039075_020 Hb_003435_030 Hb_003435_030 Hb_003873_020--Hb_003435_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.999783 6.3117 5.20247 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0986063 0.0258581 0.0969948 0.175576 4.9674

CAGE analysis