Hb_000617_360

Information

Type -
Description -
Location Contig617: 290809-294335
Sequence    

Annotation

kegg
ID rcu:RCOM_1433120
description hypothetical protein
nr
ID XP_002512421.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID Q9MA60
description Formin-like protein 11 OS=Arabidopsis thaliana GN=FH11 PE=2 SV=1
trembl
ID B9RFA2
description Formin-like protein OS=Ricinus communis GN=RCOM_1433120 PE=3 SV=1
Gene Ontology
ID GO:0003779
description formin-like protein 11

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000617_360 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002066_110 0.079768582 - - PREDICTED: calmodulin-like protein 1 [Jatropha curcas]
3 Hb_052530_020 0.0883315923 - - cytochrome B5 isoform 1, putative [Ricinus communis]
4 Hb_004137_040 0.0908435897 - - PREDICTED: serine carboxypeptidase-like 42 [Jatropha curcas]
5 Hb_002150_090 0.0925280444 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
6 Hb_005762_010 0.0927651273 - - PREDICTED: protein CHUP1, chloroplastic-like [Populus euphratica]
7 Hb_001032_020 0.0971047226 - - ankyrin repeat protein [Bruguiera gymnorhiza]
8 Hb_012098_160 0.0972482719 - - PREDICTED: pathogenesis-related protein 5-like [Jatropha curcas]
9 Hb_001080_190 0.0978998408 transcription factor TF Family: OFP conserved hypothetical protein [Ricinus communis]
10 Hb_003339_010 0.1002024746 - - hypothetical protein JCGZ_04276 [Jatropha curcas]
11 Hb_000028_190 0.1010259184 - - PREDICTED: probable inactive receptor kinase At1g48480 [Jatropha curcas]
12 Hb_000599_150 0.1023457648 - - PREDICTED: probable arabinose 5-phosphate isomerase [Jatropha curcas]
13 Hb_008054_030 0.1027414141 - - PREDICTED: VQ motif-containing protein 1-like [Jatropha curcas]
14 Hb_001095_020 0.1028110133 - - PREDICTED: F-box protein At2g26850-like [Jatropha curcas]
15 Hb_000904_120 0.104431723 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001674_010 0.1044375914 - - PREDICTED: reticulon-like protein B21 isoform X1 [Populus euphratica]
17 Hb_001817_210 0.1049891902 - - conserved hypothetical protein [Ricinus communis]
18 Hb_004635_120 0.1055808325 - - PREDICTED: rho GTPase-activating protein 4-like [Jatropha curcas]
19 Hb_001545_020 0.1072762656 - - PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X5 [Populus euphratica]
20 Hb_000103_200 0.1076374248 - - calmodulin binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_000617_360 Hb_000617_360 Hb_002066_110 Hb_002066_110 Hb_000617_360--Hb_002066_110 Hb_052530_020 Hb_052530_020 Hb_000617_360--Hb_052530_020 Hb_004137_040 Hb_004137_040 Hb_000617_360--Hb_004137_040 Hb_002150_090 Hb_002150_090 Hb_000617_360--Hb_002150_090 Hb_005762_010 Hb_005762_010 Hb_000617_360--Hb_005762_010 Hb_001032_020 Hb_001032_020 Hb_000617_360--Hb_001032_020 Hb_002066_110--Hb_002150_090 Hb_001674_010 Hb_001674_010 Hb_002066_110--Hb_001674_010 Hb_001095_020 Hb_001095_020 Hb_002066_110--Hb_001095_020 Hb_008054_030 Hb_008054_030 Hb_002066_110--Hb_008054_030 Hb_003339_010 Hb_003339_010 Hb_002066_110--Hb_003339_010 Hb_000928_030 Hb_000928_030 Hb_052530_020--Hb_000928_030 Hb_052530_020--Hb_004137_040 Hb_000599_150 Hb_000599_150 Hb_052530_020--Hb_000599_150 Hb_052530_020--Hb_002150_090 Hb_000028_190 Hb_000028_190 Hb_052530_020--Hb_000028_190 Hb_000103_200 Hb_000103_200 Hb_052530_020--Hb_000103_200 Hb_004137_040--Hb_000028_190 Hb_000483_450 Hb_000483_450 Hb_004137_040--Hb_000483_450 Hb_002221_060 Hb_002221_060 Hb_004137_040--Hb_002221_060 Hb_004137_040--Hb_000928_030 Hb_000230_300 Hb_000230_300 Hb_004137_040--Hb_000230_300 Hb_004137_040--Hb_000103_200 Hb_002150_090--Hb_000028_190 Hb_002150_090--Hb_001095_020 Hb_007163_100 Hb_007163_100 Hb_002150_090--Hb_007163_100 Hb_002150_090--Hb_008054_030 Hb_002150_090--Hb_001674_010 Hb_005762_010--Hb_003339_010 Hb_005762_010--Hb_000230_300 Hb_005762_010--Hb_008054_030 Hb_005762_010--Hb_000103_200 Hb_009023_010 Hb_009023_010 Hb_005762_010--Hb_009023_010 Hb_005762_010--Hb_004137_040 Hb_001032_020--Hb_001674_010 Hb_001032_020--Hb_008054_030 Hb_001032_020--Hb_002066_110 Hb_012098_160 Hb_012098_160 Hb_001032_020--Hb_012098_160 Hb_001032_020--Hb_007163_100 Hb_015561_010 Hb_015561_010 Hb_001032_020--Hb_015561_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.147283 1.03369 1.33115 0.0114009 0.0162871
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0133454 0.021004 0 0.0208176 1.05458

CAGE analysis