Hb_010513_010

Information

Type -
Description -
Location Contig10513: 619-5925
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID Q7FRS8
description Calcineurin B-like protein 10 OS=Arabidopsis thaliana GN=CBL10 PE=1 SV=1
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01751: 5827-6281
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010513_010 0.0 - - -
2 Hb_165071_030 0.1876570422 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_000252_130 0.2377041971 - - hypothetical protein POPTR_0011s17240g, partial [Populus trichocarpa]
4 Hb_000116_420 0.2420846966 - - PREDICTED: monosaccharide-sensing protein 2-like [Jatropha curcas]
5 Hb_082182_010 0.2466468417 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
6 Hb_002286_010 0.2494617224 - - kinase-like protein pac.x.7.4, partial [Platanus x acerifolia]
7 Hb_003095_040 0.2589026685 - - hypothetical protein CICLE_v10030016mg [Citrus clementina]
8 Hb_005439_040 0.2699878387 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
9 Hb_011484_010 0.2743877472 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
10 Hb_015690_020 0.2756656078 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
11 Hb_000369_020 0.2762233483 - - PREDICTED: probable fructokinase-7 [Jatropha curcas]
12 Hb_002486_010 0.2790155337 - - PREDICTED: sister chromatid cohesion 1 protein 1 [Jatropha curcas]
13 Hb_001114_050 0.2791133814 - - hypothetical protein RCOM_0744580 [Ricinus communis]
14 Hb_003052_220 0.2847122142 - - -
15 Hb_002805_020 0.2891675758 transcription factor TF Family: SRS transcription factor, putative [Ricinus communis]
16 Hb_002820_010 0.2901793268 - - PREDICTED: general transcription factor IIH subunit 3 isoform X2 [Jatropha curcas]
17 Hb_006738_030 0.2988321192 - - Ras-related protein Rab7 [Morus notabilis]
18 Hb_000243_140 0.2992340187 transcription factor TF Family: SRS Lateral root primordium protein-related, putative [Theobroma cacao]
19 Hb_185735_010 0.302763798 - - Heat shock factor protein HSF8, putative [Ricinus communis]
20 Hb_002835_180 0.3046831525 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_010513_010 Hb_010513_010 Hb_165071_030 Hb_165071_030 Hb_010513_010--Hb_165071_030 Hb_000252_130 Hb_000252_130 Hb_010513_010--Hb_000252_130 Hb_000116_420 Hb_000116_420 Hb_010513_010--Hb_000116_420 Hb_082182_010 Hb_082182_010 Hb_010513_010--Hb_082182_010 Hb_002286_010 Hb_002286_010 Hb_010513_010--Hb_002286_010 Hb_003095_040 Hb_003095_040 Hb_010513_010--Hb_003095_040 Hb_012979_020 Hb_012979_020 Hb_165071_030--Hb_012979_020 Hb_165071_030--Hb_000252_130 Hb_165071_030--Hb_000116_420 Hb_011484_010 Hb_011484_010 Hb_165071_030--Hb_011484_010 Hb_002820_010 Hb_002820_010 Hb_165071_030--Hb_002820_010 Hb_000252_130--Hb_002820_010 Hb_000723_190 Hb_000723_190 Hb_000252_130--Hb_000723_190 Hb_003642_050 Hb_003642_050 Hb_000252_130--Hb_003642_050 Hb_005224_010 Hb_005224_010 Hb_000252_130--Hb_005224_010 Hb_000252_130--Hb_000116_420 Hb_001894_170 Hb_001894_170 Hb_000252_130--Hb_001894_170 Hb_000454_070 Hb_000454_070 Hb_000116_420--Hb_000454_070 Hb_029888_010 Hb_029888_010 Hb_000116_420--Hb_029888_010 Hb_003750_030 Hb_003750_030 Hb_000116_420--Hb_003750_030 Hb_000116_430 Hb_000116_430 Hb_000116_420--Hb_000116_430 Hb_005439_040 Hb_005439_040 Hb_082182_010--Hb_005439_040 Hb_007747_180 Hb_007747_180 Hb_082182_010--Hb_007747_180 Hb_002486_010 Hb_002486_010 Hb_082182_010--Hb_002486_010 Hb_043485_010 Hb_043485_010 Hb_082182_010--Hb_043485_010 Hb_015690_020 Hb_015690_020 Hb_082182_010--Hb_015690_020 Hb_024468_020 Hb_024468_020 Hb_082182_010--Hb_024468_020 Hb_002286_010--Hb_000252_130 Hb_005656_100 Hb_005656_100 Hb_002286_010--Hb_005656_100 Hb_004931_100 Hb_004931_100 Hb_002286_010--Hb_004931_100 Hb_000302_290 Hb_000302_290 Hb_002286_010--Hb_000302_290 Hb_002042_080 Hb_002042_080 Hb_002286_010--Hb_002042_080 Hb_001096_030 Hb_001096_030 Hb_002286_010--Hb_001096_030 Hb_003052_220 Hb_003052_220 Hb_003095_040--Hb_003052_220 Hb_029243_040 Hb_029243_040 Hb_003095_040--Hb_029243_040 Hb_001619_080 Hb_001619_080 Hb_003095_040--Hb_001619_080 Hb_004129_150 Hb_004129_150 Hb_003095_040--Hb_004129_150 Hb_001279_130 Hb_001279_130 Hb_003095_040--Hb_001279_130 Hb_033772_050 Hb_033772_050 Hb_003095_040--Hb_033772_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.934829 0.875579 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.05283 2.53546 1.9306 1.58545 1.0113

CAGE analysis