Hb_007821_020

Information

Type -
Description -
Location Contig7821: 17753-21925
Sequence    

Annotation

kegg
ID rcu:RCOM_0671310
description cytosolic purine 5-nucleotidase, putative (EC:3.1.3.5)
nr
ID XP_012066429.1
description PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467 isoform X2 [Jatropha curcas]
swissprot
ID Q75K12
description 5'-nucleotidase domain-containing protein DDB_G0275467 OS=Dictyostelium discoideum GN=DDB_G0275467 PE=3 SV=1
trembl
ID A0A067LFD2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00488 PE=4 SV=1
Gene Ontology
ID GO:0008253
description had-superfamily subfamily 5 -nucleotidase isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_58006: 17632-18385 , PASA_asmbl_58007: 20623-52664
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007821_020 0.0 - - PREDICTED: 5'-nucleotidase domain-containing protein DDB_G0275467 isoform X2 [Jatropha curcas]
2 Hb_000567_070 0.0591766282 - - autophagy protein, putative [Ricinus communis]
3 Hb_000254_100 0.0671765655 - - PREDICTED: glyoxylate/hydroxypyruvate reductase A HPR2 [Jatropha curcas]
4 Hb_003225_020 0.0677933503 transcription factor TF Family: HB PREDICTED: homeobox protein HAT3.1 [Jatropha curcas]
5 Hb_000115_280 0.0695623447 - - PREDICTED: glutamine--tRNA ligase [Jatropha curcas]
6 Hb_031284_010 0.0717917643 - - PREDICTED: uncharacterized protein LOC105633543 [Jatropha curcas]
7 Hb_003186_020 0.07580212 - - PREDICTED: histone deacetylase 15 isoform X1 [Jatropha curcas]
8 Hb_138435_010 0.0788556681 transcription factor TF Family: SWI/SNF-BAF60b brg-1 associated factor, putative [Ricinus communis]
9 Hb_001824_080 0.0806837965 - - PREDICTED: 2-aminoethanethiol dioxygenase isoform X1 [Jatropha curcas]
10 Hb_004109_120 0.0824852415 - - PREDICTED: kinesin-related protein 6 isoform X1 [Jatropha curcas]
11 Hb_000416_200 0.0889987612 transcription factor TF Family: PHD PREDICTED: probable Histone-lysine N-methyltransferase ATXR5 [Jatropha curcas]
12 Hb_000390_230 0.0890447155 - - PREDICTED: transducin beta-like protein 3 [Jatropha curcas]
13 Hb_030414_040 0.0892815484 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHH3 isoform X1 [Jatropha curcas]
14 Hb_004096_240 0.0893519365 - - PREDICTED: uncharacterized protein LOC105638702 [Jatropha curcas]
15 Hb_000120_210 0.08970019 - - PREDICTED: uncharacterized protein LOC105630189 [Jatropha curcas]
16 Hb_001018_090 0.0912726369 - - PREDICTED: eukaryotic translation initiation factor 3 subunit L-like [Jatropha curcas]
17 Hb_000847_080 0.0912885631 - - PREDICTED: HAUS augmin-like complex subunit 3 [Jatropha curcas]
18 Hb_000640_160 0.0916686079 - - ATP-dependent Clp protease proteolytic subunit, putative [Ricinus communis]
19 Hb_000003_170 0.0935450567 - - PREDICTED: reticulocalbin-2 [Jatropha curcas]
20 Hb_010931_070 0.0937096192 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 2 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007821_020 Hb_007821_020 Hb_000567_070 Hb_000567_070 Hb_007821_020--Hb_000567_070 Hb_000254_100 Hb_000254_100 Hb_007821_020--Hb_000254_100 Hb_003225_020 Hb_003225_020 Hb_007821_020--Hb_003225_020 Hb_000115_280 Hb_000115_280 Hb_007821_020--Hb_000115_280 Hb_031284_010 Hb_031284_010 Hb_007821_020--Hb_031284_010 Hb_003186_020 Hb_003186_020 Hb_007821_020--Hb_003186_020 Hb_000390_230 Hb_000390_230 Hb_000567_070--Hb_000390_230 Hb_000567_070--Hb_000254_100 Hb_000567_070--Hb_003186_020 Hb_006483_110 Hb_006483_110 Hb_000567_070--Hb_006483_110 Hb_000567_070--Hb_000115_280 Hb_000847_080 Hb_000847_080 Hb_000254_100--Hb_000847_080 Hb_004109_120 Hb_004109_120 Hb_000254_100--Hb_004109_120 Hb_030414_040 Hb_030414_040 Hb_000254_100--Hb_030414_040 Hb_000254_100--Hb_003186_020 Hb_001824_080 Hb_001824_080 Hb_000254_100--Hb_001824_080 Hb_000640_160 Hb_000640_160 Hb_003225_020--Hb_000640_160 Hb_003225_020--Hb_031284_010 Hb_001619_050 Hb_001619_050 Hb_003225_020--Hb_001619_050 Hb_007283_010 Hb_007283_010 Hb_003225_020--Hb_007283_010 Hb_005731_110 Hb_005731_110 Hb_003225_020--Hb_005731_110 Hb_000115_280--Hb_031284_010 Hb_000115_280--Hb_003186_020 Hb_008059_010 Hb_008059_010 Hb_000115_280--Hb_008059_010 Hb_000115_280--Hb_000390_230 Hb_053079_020 Hb_053079_020 Hb_000115_280--Hb_053079_020 Hb_000457_230 Hb_000457_230 Hb_000115_280--Hb_000457_230 Hb_031284_010--Hb_008059_010 Hb_031284_010--Hb_003186_020 Hb_138435_010 Hb_138435_010 Hb_031284_010--Hb_138435_010 Hb_000120_210 Hb_000120_210 Hb_031284_010--Hb_000120_210 Hb_031284_010--Hb_000457_230 Hb_000373_080 Hb_000373_080 Hb_003186_020--Hb_000373_080 Hb_003186_020--Hb_000457_230 Hb_000175_410 Hb_000175_410 Hb_003186_020--Hb_000175_410 Hb_000214_050 Hb_000214_050 Hb_003186_020--Hb_000214_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.74992 3.07162 8.36822 3.43557 4.40404 4.65821
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.86341 3.44608 3.06313 3.53582 5.75537

CAGE analysis