Hb_007659_050

Information

Type -
Description -
Location Contig7659: 54745-58704
Sequence    

Annotation

kegg
ID rcu:RCOM_1109430
description lipid binding protein, putative
nr
ID XP_012066290.1
description PREDICTED: xylogen-like protein 11 [Jatropha curcas]
swissprot
ID Q9LZH5
description Non-specific lipid transfer protein GPI-anchored 2 OS=Arabidopsis thaliana GN=LTPG2 PE=2 SV=1
trembl
ID A0A067L3B0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23849 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_57408: 54905-55061 , PASA_asmbl_57409: 55121-58705
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007659_050 0.0 - - PREDICTED: xylogen-like protein 11 [Jatropha curcas]
2 Hb_002809_080 0.1067866083 - - conserved hypothetical protein [Ricinus communis]
3 Hb_001079_050 0.1106071357 - - Calmodulin, putative [Ricinus communis]
4 Hb_029510_120 0.1141981322 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
5 Hb_006154_010 0.119900594 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
6 Hb_178049_010 0.1209543615 - - PREDICTED: plasma membrane ATPase 2-like isoform X1 [Jatropha curcas]
7 Hb_002370_050 0.1213561369 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
8 Hb_001688_030 0.125921986 - - hypothetical protein JCGZ_10716 [Jatropha curcas]
9 Hb_000103_300 0.1264455996 - - PREDICTED: perakine reductase-like [Jatropha curcas]
10 Hb_002781_040 0.1288981338 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000457_120 0.1305004354 - - PREDICTED: death-associated protein kinase dapk-1 [Jatropha curcas]
12 Hb_001663_060 0.1326180153 - - ribonuclease t2, putative [Ricinus communis]
13 Hb_035995_010 0.1330105847 - - -
14 Hb_000329_010 0.1345554925 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]
15 Hb_154038_040 0.1349730764 - - nutrient reservoir, putative [Ricinus communis]
16 Hb_000020_200 0.1368685664 - - hypothetical protein EUGRSUZ_B00411 [Eucalyptus grandis]
17 Hb_000003_580 0.1369714155 - - conserved hypothetical protein [Ricinus communis]
18 Hb_002284_060 0.1382220863 - - sugar transporter, putative [Ricinus communis]
19 Hb_001117_180 0.138756294 - - PREDICTED: uncharacterized protein LOC105629703 isoform X1 [Jatropha curcas]
20 Hb_003376_140 0.1395714434 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]

Gene co-expression network

sample Hb_007659_050 Hb_007659_050 Hb_002809_080 Hb_002809_080 Hb_007659_050--Hb_002809_080 Hb_001079_050 Hb_001079_050 Hb_007659_050--Hb_001079_050 Hb_029510_120 Hb_029510_120 Hb_007659_050--Hb_029510_120 Hb_006154_010 Hb_006154_010 Hb_007659_050--Hb_006154_010 Hb_178049_010 Hb_178049_010 Hb_007659_050--Hb_178049_010 Hb_002370_050 Hb_002370_050 Hb_007659_050--Hb_002370_050 Hb_000329_010 Hb_000329_010 Hb_002809_080--Hb_000329_010 Hb_002809_080--Hb_002370_050 Hb_000076_280 Hb_000076_280 Hb_002809_080--Hb_000076_280 Hb_005000_280 Hb_005000_280 Hb_002809_080--Hb_005000_280 Hb_149055_010 Hb_149055_010 Hb_002809_080--Hb_149055_010 Hb_031224_010 Hb_031224_010 Hb_002809_080--Hb_031224_010 Hb_001079_050--Hb_006154_010 Hb_169077_030 Hb_169077_030 Hb_001079_050--Hb_169077_030 Hb_003376_140 Hb_003376_140 Hb_001079_050--Hb_003376_140 Hb_004531_160 Hb_004531_160 Hb_001079_050--Hb_004531_160 Hb_000103_300 Hb_000103_300 Hb_001079_050--Hb_000103_300 Hb_010142_060 Hb_010142_060 Hb_001079_050--Hb_010142_060 Hb_000946_070 Hb_000946_070 Hb_029510_120--Hb_000946_070 Hb_029510_120--Hb_002370_050 Hb_002233_160 Hb_002233_160 Hb_029510_120--Hb_002233_160 Hb_001688_030 Hb_001688_030 Hb_029510_120--Hb_001688_030 Hb_029510_120--Hb_002809_080 Hb_006154_010--Hb_000103_300 Hb_000193_070 Hb_000193_070 Hb_006154_010--Hb_000193_070 Hb_006154_010--Hb_003376_140 Hb_006154_010--Hb_169077_030 Hb_000152_570 Hb_000152_570 Hb_006154_010--Hb_000152_570 Hb_002171_020 Hb_002171_020 Hb_178049_010--Hb_002171_020 Hb_005648_020 Hb_005648_020 Hb_178049_010--Hb_005648_020 Hb_003466_010 Hb_003466_010 Hb_178049_010--Hb_003466_010 Hb_122951_010 Hb_122951_010 Hb_178049_010--Hb_122951_010 Hb_009736_020 Hb_009736_020 Hb_178049_010--Hb_009736_020 Hb_004558_060 Hb_004558_060 Hb_178049_010--Hb_004558_060 Hb_007237_080 Hb_007237_080 Hb_002370_050--Hb_007237_080 Hb_002370_050--Hb_031224_010 Hb_002370_050--Hb_000329_010 Hb_027405_010 Hb_027405_010 Hb_002370_050--Hb_027405_010 Hb_026144_040 Hb_026144_040 Hb_002370_050--Hb_026144_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 3.22061 4.71521 18.2388 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.277304 0.490585 0 3.02483 6.33341

CAGE analysis