Hb_029510_120

Information

Type -
Description -
Location Contig29510: 68040-68996
Sequence    

Annotation

kegg
ID sly:101260330
description protein PLANT CADMIUM RESISTANCE 8-like
nr
ID XP_012073384.1
description PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
swissprot
ID Q8S8T8
description Protein PLANT CADMIUM RESISTANCE 10 OS=Arabidopsis thaliana GN=PCR10 PE=2 SV=1
trembl
ID A0A067KM13
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06312 PE=4 SV=1
Gene Ontology
ID GO:0005623
description protein plant cadmium resistance 8-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_029510_120 0.0 - - PREDICTED: protein PLANT CADMIUM RESISTANCE 8-like [Jatropha curcas]
2 Hb_007659_050 0.1141981322 - - PREDICTED: xylogen-like protein 11 [Jatropha curcas]
3 Hb_000946_070 0.1523529586 - - chaperone protein DNAj, putative [Ricinus communis]
4 Hb_002370_050 0.1591746762 - - hypothetical protein JCGZ_18849 [Jatropha curcas]
5 Hb_002233_160 0.1610236619 - - PREDICTED: uncharacterized protein LOC105633094 [Jatropha curcas]
6 Hb_001688_030 0.163848948 - - hypothetical protein JCGZ_10716 [Jatropha curcas]
7 Hb_002809_080 0.1672348501 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002781_040 0.1700552426 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000103_300 0.1714631023 - - PREDICTED: perakine reductase-like [Jatropha curcas]
10 Hb_006154_010 0.1724219058 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
11 Hb_154038_040 0.1731258544 - - nutrient reservoir, putative [Ricinus communis]
12 Hb_002284_060 0.1769364539 - - sugar transporter, putative [Ricinus communis]
13 Hb_007237_080 0.177643935 - - amino acid transporter, putative [Ricinus communis]
14 Hb_002876_340 0.1776665742 - - hypothetical protein POPTR_0013s11770g [Populus trichocarpa]
15 Hb_007590_100 0.1788319706 - - PREDICTED: phosphoinositide phospholipase C 4-like [Jatropha curcas]
16 Hb_001677_090 0.1788367024 - - PREDICTED: CASP-like protein 5B2 [Jatropha curcas]
17 Hb_005542_070 0.1789588517 - - hypothetical protein ZEAMMB73_851878 [Zea mays]
18 Hb_026144_040 0.1790017884 - - -
19 Hb_007479_080 0.179047071 - - PREDICTED: uncharacterized protein LOC105649774 isoform X1 [Jatropha curcas]
20 Hb_000329_010 0.1800008268 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]

Gene co-expression network

sample Hb_029510_120 Hb_029510_120 Hb_007659_050 Hb_007659_050 Hb_029510_120--Hb_007659_050 Hb_000946_070 Hb_000946_070 Hb_029510_120--Hb_000946_070 Hb_002370_050 Hb_002370_050 Hb_029510_120--Hb_002370_050 Hb_002233_160 Hb_002233_160 Hb_029510_120--Hb_002233_160 Hb_001688_030 Hb_001688_030 Hb_029510_120--Hb_001688_030 Hb_002809_080 Hb_002809_080 Hb_029510_120--Hb_002809_080 Hb_007659_050--Hb_002809_080 Hb_001079_050 Hb_001079_050 Hb_007659_050--Hb_001079_050 Hb_006154_010 Hb_006154_010 Hb_007659_050--Hb_006154_010 Hb_178049_010 Hb_178049_010 Hb_007659_050--Hb_178049_010 Hb_007659_050--Hb_002370_050 Hb_007416_290 Hb_007416_290 Hb_000946_070--Hb_007416_290 Hb_000057_100 Hb_000057_100 Hb_000946_070--Hb_000057_100 Hb_001677_090 Hb_001677_090 Hb_000946_070--Hb_001677_090 Hb_117639_010 Hb_117639_010 Hb_000946_070--Hb_117639_010 Hb_022250_160 Hb_022250_160 Hb_000946_070--Hb_022250_160 Hb_007237_080 Hb_007237_080 Hb_002370_050--Hb_007237_080 Hb_002370_050--Hb_002809_080 Hb_031224_010 Hb_031224_010 Hb_002370_050--Hb_031224_010 Hb_000329_010 Hb_000329_010 Hb_002370_050--Hb_000329_010 Hb_027405_010 Hb_027405_010 Hb_002370_050--Hb_027405_010 Hb_026144_040 Hb_026144_040 Hb_002370_050--Hb_026144_040 Hb_000260_110 Hb_000260_110 Hb_002233_160--Hb_000260_110 Hb_005542_070 Hb_005542_070 Hb_002233_160--Hb_005542_070 Hb_012368_050 Hb_012368_050 Hb_002233_160--Hb_012368_050 Hb_002781_040 Hb_002781_040 Hb_002233_160--Hb_002781_040 Hb_000025_160 Hb_000025_160 Hb_002233_160--Hb_000025_160 Hb_006002_050 Hb_006002_050 Hb_002233_160--Hb_006002_050 Hb_008021_050 Hb_008021_050 Hb_001688_030--Hb_008021_050 Hb_000093_010 Hb_000093_010 Hb_001688_030--Hb_000093_010 Hb_154038_040 Hb_154038_040 Hb_001688_030--Hb_154038_040 Hb_001360_020 Hb_001360_020 Hb_001688_030--Hb_001360_020 Hb_002384_030 Hb_002384_030 Hb_001688_030--Hb_002384_030 Hb_133492_010 Hb_133492_010 Hb_001688_030--Hb_133492_010 Hb_002809_080--Hb_000329_010 Hb_000076_280 Hb_000076_280 Hb_002809_080--Hb_000076_280 Hb_005000_280 Hb_005000_280 Hb_002809_080--Hb_005000_280 Hb_149055_010 Hb_149055_010 Hb_002809_080--Hb_149055_010 Hb_002809_080--Hb_031224_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.170466 0.182252 0.824562 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0830597 0 0.170633 0.319871

CAGE analysis