Hb_006970_070

Information

Type -
Description -
Location Contig6970: 72999-73578
Sequence    

Annotation

kegg
ID rcu:RCOM_1576960
description hypothetical protein
nr
ID XP_002513450.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RI81
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1576960 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006970_070 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_171537_010 0.3225622383 - - serine/threonine-protein kinase bri1, putative [Ricinus communis]
3 Hb_001545_030 0.3324400903 - - -
4 Hb_163837_010 0.3372551326 - - PREDICTED: putative F-box protein At1g65770 [Eucalyptus grandis]
5 Hb_003777_010 0.3430722283 - - -
6 Hb_074108_010 0.3466901865 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
7 Hb_014510_010 0.3511797504 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
8 Hb_004296_030 0.3710556357 - - PREDICTED: gamma-tubulin complex component 3 [Jatropha curcas]
9 Hb_005045_040 0.3782354063 - - hypothetical protein POPTR_0017s04090g, partial [Populus trichocarpa]
10 Hb_005699_080 0.3793692176 - - PREDICTED: ABC transporter G family member 10-like [Jatropha curcas]
11 Hb_011671_060 0.3817357577 transcription factor TF Family: C2H2 hypothetical protein JCGZ_26269 [Jatropha curcas]
12 Hb_004604_020 0.3831756773 - - PREDICTED: uncharacterized protein LOC102581016 [Solanum tuberosum]
13 Hb_012753_080 0.3866163019 - - -
14 Hb_003793_020 0.3867788863 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000220_140 0.3975456391 - - palmitoyl-acyl carrier protein thioesterase [Ricinus communis]
16 Hb_006478_170 0.3985478721 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
17 Hb_047923_020 0.4015515451 - - polyprotein [Citrus endogenous pararetrovirus]
18 Hb_122911_020 0.4019147876 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
19 Hb_001976_080 0.4047592003 transcription factor TF Family: AP2 PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Jatropha curcas]
20 Hb_001649_120 0.4065039068 - - -

Gene co-expression network

sample Hb_006970_070 Hb_006970_070 Hb_171537_010 Hb_171537_010 Hb_006970_070--Hb_171537_010 Hb_001545_030 Hb_001545_030 Hb_006970_070--Hb_001545_030 Hb_163837_010 Hb_163837_010 Hb_006970_070--Hb_163837_010 Hb_003777_010 Hb_003777_010 Hb_006970_070--Hb_003777_010 Hb_074108_010 Hb_074108_010 Hb_006970_070--Hb_074108_010 Hb_014510_010 Hb_014510_010 Hb_006970_070--Hb_014510_010 Hb_002383_030 Hb_002383_030 Hb_171537_010--Hb_002383_030 Hb_002876_160 Hb_002876_160 Hb_171537_010--Hb_002876_160 Hb_171537_010--Hb_074108_010 Hb_000210_090 Hb_000210_090 Hb_171537_010--Hb_000210_090 Hb_002760_040 Hb_002760_040 Hb_171537_010--Hb_002760_040 Hb_002700_080 Hb_002700_080 Hb_171537_010--Hb_002700_080 Hb_004296_030 Hb_004296_030 Hb_001545_030--Hb_004296_030 Hb_005045_040 Hb_005045_040 Hb_001545_030--Hb_005045_040 Hb_001545_030--Hb_014510_010 Hb_001338_060 Hb_001338_060 Hb_001545_030--Hb_001338_060 Hb_000483_110 Hb_000483_110 Hb_001545_030--Hb_000483_110 Hb_001338_050 Hb_001338_050 Hb_001545_030--Hb_001338_050 Hb_012522_010 Hb_012522_010 Hb_163837_010--Hb_012522_010 Hb_161072_010 Hb_161072_010 Hb_163837_010--Hb_161072_010 Hb_000304_060 Hb_000304_060 Hb_163837_010--Hb_000304_060 Hb_000045_150 Hb_000045_150 Hb_163837_010--Hb_000045_150 Hb_000637_120 Hb_000637_120 Hb_163837_010--Hb_000637_120 Hb_012760_020 Hb_012760_020 Hb_163837_010--Hb_012760_020 Hb_003777_010--Hb_005045_040 Hb_003777_010--Hb_001338_060 Hb_071586_010 Hb_071586_010 Hb_003777_010--Hb_071586_010 Hb_001462_020 Hb_001462_020 Hb_003777_010--Hb_001462_020 Hb_006478_170 Hb_006478_170 Hb_003777_010--Hb_006478_170 Hb_096671_010 Hb_096671_010 Hb_003777_010--Hb_096671_010 Hb_011671_060 Hb_011671_060 Hb_074108_010--Hb_011671_060 Hb_074108_010--Hb_000304_060 Hb_074108_010--Hb_002383_030 Hb_000980_070 Hb_000980_070 Hb_074108_010--Hb_000980_070 Hb_001976_080 Hb_001976_080 Hb_074108_010--Hb_001976_080 Hb_014510_010--Hb_004296_030 Hb_014510_010--Hb_006478_170 Hb_000215_340 Hb_000215_340 Hb_014510_010--Hb_000215_340 Hb_005841_080 Hb_005841_080 Hb_014510_010--Hb_005841_080 Hb_014510_010--Hb_001338_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.55792 0 0 1.19024 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.53595 0.660677 0

CAGE analysis