Hb_014510_010

Information

Type -
Description -
Location Contig14510: 22114-34255
Sequence    

Annotation

kegg
ID rcu:RCOM_0685770
description serine-threonine protein kinase, plant-type, putative (EC:2.7.11.23 1.3.1.74)
nr
ID KDP46929.1
description hypothetical protein JCGZ_08917 [Jatropha curcas]
swissprot
ID C0LGP4
description Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=2 SV=1
trembl
ID A0A067LQQ8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08917 PE=4 SV=1
Gene Ontology
ID GO:0016020
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014510_010 0.0 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
2 Hb_004296_030 0.1636672685 - - PREDICTED: gamma-tubulin complex component 3 [Jatropha curcas]
3 Hb_006478_170 0.1933675497 - - hypothetical protein POPTR_0005s23360g [Populus trichocarpa]
4 Hb_000215_340 0.2316967288 - - gamma glutamyl transpeptidases, putative [Ricinus communis]
5 Hb_001545_030 0.2349686639 - - -
6 Hb_005841_080 0.2481913713 - - hypothetical protein POPTR_0018s11370g [Populus trichocarpa]
7 Hb_001338_050 0.2609148186 - - hypothetical protein POPTR_0016s05400g [Populus trichocarpa]
8 Hb_005736_070 0.2643259455 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 1 [Jatropha curcas]
9 Hb_001810_010 0.2666836097 - - PREDICTED: wall-associated receptor kinase-like 1 [Nelumbo nucifera]
10 Hb_005157_010 0.2700161277 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
11 Hb_005288_030 0.2766226175 - - PREDICTED: uncharacterized protein LOC105647760 [Jatropha curcas]
12 Hb_128912_010 0.2770182142 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
13 Hb_000685_060 0.2776652502 - - ring finger protein, putative [Ricinus communis]
14 Hb_002660_100 0.2821510851 - - plasma membrane intrinsic protein [Hevea brasiliensis]
15 Hb_122911_020 0.284033411 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
16 Hb_003376_340 0.284524243 - - conserved hypothetical protein [Ricinus communis]
17 Hb_002217_440 0.2864408299 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
18 Hb_004619_010 0.2876626557 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
19 Hb_000000_140 0.2890158841 - - -
20 Hb_000532_060 0.2908786013 - - copper-transporting atpase p-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_014510_010 Hb_014510_010 Hb_004296_030 Hb_004296_030 Hb_014510_010--Hb_004296_030 Hb_006478_170 Hb_006478_170 Hb_014510_010--Hb_006478_170 Hb_000215_340 Hb_000215_340 Hb_014510_010--Hb_000215_340 Hb_001545_030 Hb_001545_030 Hb_014510_010--Hb_001545_030 Hb_005841_080 Hb_005841_080 Hb_014510_010--Hb_005841_080 Hb_001338_050 Hb_001338_050 Hb_014510_010--Hb_001338_050 Hb_004296_030--Hb_001545_030 Hb_004296_030--Hb_006478_170 Hb_005045_040 Hb_005045_040 Hb_004296_030--Hb_005045_040 Hb_000220_140 Hb_000220_140 Hb_004296_030--Hb_000220_140 Hb_008643_150 Hb_008643_150 Hb_004296_030--Hb_008643_150 Hb_005288_030 Hb_005288_030 Hb_006478_170--Hb_005288_030 Hb_006478_170--Hb_000220_140 Hb_003777_010 Hb_003777_010 Hb_006478_170--Hb_003777_010 Hb_006478_170--Hb_005045_040 Hb_011214_140 Hb_011214_140 Hb_000215_340--Hb_011214_140 Hb_000685_060 Hb_000685_060 Hb_000215_340--Hb_000685_060 Hb_051100_010 Hb_051100_010 Hb_000215_340--Hb_051100_010 Hb_003299_010 Hb_003299_010 Hb_000215_340--Hb_003299_010 Hb_001009_110 Hb_001009_110 Hb_000215_340--Hb_001009_110 Hb_005736_070 Hb_005736_070 Hb_000215_340--Hb_005736_070 Hb_001545_030--Hb_005045_040 Hb_001338_060 Hb_001338_060 Hb_001545_030--Hb_001338_060 Hb_000483_110 Hb_000483_110 Hb_001545_030--Hb_000483_110 Hb_001545_030--Hb_001338_050 Hb_005157_010 Hb_005157_010 Hb_005841_080--Hb_005157_010 Hb_005841_080--Hb_000685_060 Hb_005841_080--Hb_003299_010 Hb_002273_080 Hb_002273_080 Hb_005841_080--Hb_002273_080 Hb_000215_410 Hb_000215_410 Hb_005841_080--Hb_000215_410 Hb_000106_070 Hb_000106_070 Hb_005841_080--Hb_000106_070 Hb_001269_040 Hb_001269_040 Hb_001338_050--Hb_001269_040 Hb_025194_010 Hb_025194_010 Hb_001338_050--Hb_025194_010 Hb_004976_060 Hb_004976_060 Hb_001338_050--Hb_004976_060 Hb_001338_050--Hb_005157_010 Hb_001338_050--Hb_005841_080 Hb_089920_010 Hb_089920_010 Hb_001338_050--Hb_089920_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.142304 0.00336592 0.00885402 0.00866184 0.0039293
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0296653 0.064139 0

CAGE analysis