Hb_008643_150

Information

Type -
Description -
Location Contig8643: 147074-150121
Sequence    

Annotation

kegg
ID mtr:MTR_2g066470
description Receptor protein kinase-like protein
nr
ID KDO72527.1
description hypothetical protein CISIN_1g0034652mg, partial [Citrus sinensis]
swissprot
ID Q8AVI4
description Leucine-rich repeat protein SHOC-2 OS=Xenopus laevis GN=shoc2 PE=2 SV=1
trembl
ID A0A067GAI6
description Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g0034652mg PE=4 SV=1
Gene Ontology
ID GO:0003824
description receptor like protein 33

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008643_150 0.0 - - hypothetical protein CISIN_1g0034652mg, partial [Citrus sinensis]
2 Hb_000905_030 0.1403327038 - - PREDICTED: cytochrome P450 87A3-like [Jatropha curcas]
3 Hb_001168_080 0.1416071739 - - kinase, putative [Ricinus communis]
4 Hb_001073_020 0.1424473993 - - hypothetical protein CISIN_1g031854mg [Citrus sinensis]
5 Hb_005622_080 0.1500342915 - - Aspartic proteinase nepenthesin-2 precursor, putative [Ricinus communis]
6 Hb_032582_010 0.1500764485 - - PREDICTED: cytochrome P450 CYP82D47-like [Jatropha curcas]
7 Hb_008616_020 0.1523925902 - - unnamed protein product [Vitis vinifera]
8 Hb_032215_070 0.1584073647 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_001427_130 0.1584845936 - - PREDICTED: uncharacterized protein LOC101510272 [Cicer arietinum]
10 Hb_008052_020 0.1588720093 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Brassica rapa]
11 Hb_008214_010 0.1589129245 - - PREDICTED: uncharacterized protein LOC105797726 [Gossypium raimondii]
12 Hb_003010_060 0.1590222074 - - Patatin T5 precursor, putative [Ricinus communis]
13 Hb_002553_080 0.1592284905 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF096-like [Eucalyptus grandis]
14 Hb_002005_010 0.159377493 transcription factor TF Family: MYB PREDICTED: transcription factor MYB39-like isoform X2 [Populus euphratica]
15 Hb_021901_010 0.1602271251 - - -
16 Hb_000185_060 0.1612077897 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
17 Hb_013654_010 0.1618827596 - - unnamed protein product [Vitis vinifera]
18 Hb_011362_020 0.1619785237 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_010839_020 0.1632543515 - - -
20 Hb_002138_030 0.1638304167 - - -

Gene co-expression network

sample Hb_008643_150 Hb_008643_150 Hb_000905_030 Hb_000905_030 Hb_008643_150--Hb_000905_030 Hb_001168_080 Hb_001168_080 Hb_008643_150--Hb_001168_080 Hb_001073_020 Hb_001073_020 Hb_008643_150--Hb_001073_020 Hb_005622_080 Hb_005622_080 Hb_008643_150--Hb_005622_080 Hb_032582_010 Hb_032582_010 Hb_008643_150--Hb_032582_010 Hb_008616_020 Hb_008616_020 Hb_008643_150--Hb_008616_020 Hb_008052_020 Hb_008052_020 Hb_000905_030--Hb_008052_020 Hb_008214_010 Hb_008214_010 Hb_000905_030--Hb_008214_010 Hb_002005_010 Hb_002005_010 Hb_000905_030--Hb_002005_010 Hb_032215_070 Hb_032215_070 Hb_000905_030--Hb_032215_070 Hb_001427_130 Hb_001427_130 Hb_000905_030--Hb_001427_130 Hb_003010_060 Hb_003010_060 Hb_000905_030--Hb_003010_060 Hb_001168_080--Hb_000905_030 Hb_151236_010 Hb_151236_010 Hb_001168_080--Hb_151236_010 Hb_002138_030 Hb_002138_030 Hb_001168_080--Hb_002138_030 Hb_010839_020 Hb_010839_020 Hb_001168_080--Hb_010839_020 Hb_004195_050 Hb_004195_050 Hb_001168_080--Hb_004195_050 Hb_007382_060 Hb_007382_060 Hb_001168_080--Hb_007382_060 Hb_021901_010 Hb_021901_010 Hb_001073_020--Hb_021901_010 Hb_001073_020--Hb_001168_080 Hb_001073_020--Hb_032582_010 Hb_001073_020--Hb_000905_030 Hb_001073_020--Hb_010839_020 Hb_001073_020--Hb_002138_030 Hb_060245_010 Hb_060245_010 Hb_005622_080--Hb_060245_010 Hb_001814_090 Hb_001814_090 Hb_005622_080--Hb_001814_090 Hb_001476_010 Hb_001476_010 Hb_005622_080--Hb_001476_010 Hb_012120_010 Hb_012120_010 Hb_005622_080--Hb_012120_010 Hb_140406_010 Hb_140406_010 Hb_005622_080--Hb_140406_010 Hb_032920_080 Hb_032920_080 Hb_005622_080--Hb_032920_080 Hb_002677_010 Hb_002677_010 Hb_032582_010--Hb_002677_010 Hb_032582_010--Hb_008616_020 Hb_002986_110 Hb_002986_110 Hb_032582_010--Hb_002986_110 Hb_013654_010 Hb_013654_010 Hb_032582_010--Hb_013654_010 Hb_032582_010--Hb_000905_030 Hb_000185_060 Hb_000185_060 Hb_032582_010--Hb_000185_060 Hb_008616_020--Hb_000185_060 Hb_001376_040 Hb_001376_040 Hb_008616_020--Hb_001376_040 Hb_008616_020--Hb_002677_010 Hb_008053_070 Hb_008053_070 Hb_008616_020--Hb_008053_070 Hb_008616_020--Hb_000905_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.11258 0.0822754 0 0 0.0319845
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.121516 2.43704 0

CAGE analysis