Hb_006351_070

Information

Type -
Description -
Location Contig6351: 89329-90203
Sequence    

Annotation

kegg
ID rcu:RCOM_0497910
description heat-shock protein, putative
nr
ID XP_002530399.1
description heat-shock protein, putative [Ricinus communis]
swissprot
ID P27880
description 18.2 kDa class I heat shock protein OS=Medicago sativa GN=HSP18.2 PE=2 SV=1
trembl
ID B9SWN0
description Heat-shock protein, putative OS=Ricinus communis GN=RCOM_0497910 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006351_070 0.0 - - heat-shock protein, putative [Ricinus communis]
2 Hb_011242_030 0.2697404531 - - -
3 Hb_001529_070 0.2832933599 transcription factor TF Family: AP2 hypothetical protein POPTR_0018s09900g [Populus trichocarpa]
4 Hb_000175_580 0.2836755768 transcription factor, desease resistance TF Family: C3H, Gene Name: zf-CCCH hypothetical protein POPTR_0013s00890g [Populus trichocarpa]
5 Hb_001437_050 0.2868606074 - - PREDICTED: ABC transporter G family member 28 [Jatropha curcas]
6 Hb_015807_110 0.2899032216 - - thioredoxin h [Hevea brasiliensis]
7 Hb_002685_180 0.3027388716 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
8 Hb_000449_060 0.3066867291 - - -
9 Hb_001865_110 0.313028503 - - -
10 Hb_107504_010 0.3148669067 - - -
11 Hb_106029_010 0.3149469663 - - Transcription factor ICE1, putative [Ricinus communis]
12 Hb_001936_140 0.3150524644 - - PREDICTED: ATP-citrate synthase alpha chain protein 1 [Jatropha curcas]
13 Hb_141408_010 0.3183385133 - - PREDICTED: uncharacterized protein LOC105631382 [Jatropha curcas]
14 Hb_003001_100 0.3236765799 - - PREDICTED: uncharacterized protein LOC103334281 [Prunus mume]
15 Hb_019033_010 0.3299754033 - - PREDICTED: uncharacterized protein LOC105643397 [Jatropha curcas]
16 Hb_005615_060 0.3314029793 - - PREDICTED: uncharacterized protein LOC105636752 [Jatropha curcas]
17 Hb_005736_040 0.333573427 - - -
18 Hb_148262_020 0.3339127023 - - -
19 Hb_007904_270 0.3360716497 - - -
20 Hb_031474_030 0.3370595838 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]

Gene co-expression network

sample Hb_006351_070 Hb_006351_070 Hb_011242_030 Hb_011242_030 Hb_006351_070--Hb_011242_030 Hb_001529_070 Hb_001529_070 Hb_006351_070--Hb_001529_070 Hb_000175_580 Hb_000175_580 Hb_006351_070--Hb_000175_580 Hb_001437_050 Hb_001437_050 Hb_006351_070--Hb_001437_050 Hb_015807_110 Hb_015807_110 Hb_006351_070--Hb_015807_110 Hb_002685_180 Hb_002685_180 Hb_006351_070--Hb_002685_180 Hb_011242_030--Hb_002685_180 Hb_019033_010 Hb_019033_010 Hb_011242_030--Hb_019033_010 Hb_000453_210 Hb_000453_210 Hb_011242_030--Hb_000453_210 Hb_011242_030--Hb_001437_050 Hb_000275_130 Hb_000275_130 Hb_011242_030--Hb_000275_130 Hb_001495_060 Hb_001495_060 Hb_011242_030--Hb_001495_060 Hb_033594_070 Hb_033594_070 Hb_001529_070--Hb_033594_070 Hb_001529_070--Hb_000175_580 Hb_002081_170 Hb_002081_170 Hb_001529_070--Hb_002081_170 Hb_004102_030 Hb_004102_030 Hb_001529_070--Hb_004102_030 Hb_007386_010 Hb_007386_010 Hb_001529_070--Hb_007386_010 Hb_032974_010 Hb_032974_010 Hb_001529_070--Hb_032974_010 Hb_160366_010 Hb_160366_010 Hb_000175_580--Hb_160366_010 Hb_000123_200 Hb_000123_200 Hb_000175_580--Hb_000123_200 Hb_021906_010 Hb_021906_010 Hb_000175_580--Hb_021906_010 Hb_141408_010 Hb_141408_010 Hb_000175_580--Hb_141408_010 Hb_002099_010 Hb_002099_010 Hb_000175_580--Hb_002099_010 Hb_001437_050--Hb_019033_010 Hb_002233_110 Hb_002233_110 Hb_001437_050--Hb_002233_110 Hb_000091_100 Hb_000091_100 Hb_001437_050--Hb_000091_100 Hb_004502_080 Hb_004502_080 Hb_001437_050--Hb_004502_080 Hb_000567_280 Hb_000567_280 Hb_001437_050--Hb_000567_280 Hb_100485_010 Hb_100485_010 Hb_015807_110--Hb_100485_010 Hb_053373_010 Hb_053373_010 Hb_015807_110--Hb_053373_010 Hb_009038_010 Hb_009038_010 Hb_015807_110--Hb_009038_010 Hb_128524_010 Hb_128524_010 Hb_015807_110--Hb_128524_010 Hb_005615_060 Hb_005615_060 Hb_015807_110--Hb_005615_060 Hb_002685_180--Hb_000453_210 Hb_002685_180--Hb_001495_060 Hb_007904_090 Hb_007904_090 Hb_002685_180--Hb_007904_090 Hb_000376_160 Hb_000376_160 Hb_002685_180--Hb_000376_160 Hb_002685_180--Hb_019033_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.220202 0.701109 0.735963 0.130444 0.414181 0.246813
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.10903 1.51688 0 0 0.570327

CAGE analysis