Hb_141408_010

Information

Type -
Description -
Location Contig141408: 383-784
Sequence    

Annotation

kegg
ID rcu:RCOM_0134370
description hypothetical protein
nr
ID XP_012068870.1
description PREDICTED: uncharacterized protein LOC105631382 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L0E6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24687 PE=4 SV=1
Gene Ontology
ID GO:0016702
description PREDICTED: uncharacterized protein LOC105631382

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_141408_010 0.0 - - PREDICTED: uncharacterized protein LOC105631382 [Jatropha curcas]
2 Hb_000956_140 0.1512496218 - - -
3 Hb_137268_010 0.1547623174 - - -
4 Hb_000083_190 0.1644598198 - - low affinity nitrate transporter, partial [Triticum aestivum]
5 Hb_052600_010 0.1679373713 - - -
6 Hb_001241_090 0.1679888776 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
7 Hb_140618_010 0.1680027156 - - -
8 Hb_005396_140 0.1690888662 - - -
9 Hb_001105_080 0.1717084877 - - -
10 Hb_005834_030 0.1985462389 - - -
11 Hb_001534_020 0.203285786 - - conserved hypothetical protein [Ricinus communis]
12 Hb_003675_010 0.2048484395 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
13 Hb_000270_820 0.2199363926 - - -
14 Hb_001865_110 0.2231568275 - - -
15 Hb_000175_580 0.2457664661 transcription factor, desease resistance TF Family: C3H, Gene Name: zf-CCCH hypothetical protein POPTR_0013s00890g [Populus trichocarpa]
16 Hb_135585_010 0.2563850294 - - -
17 Hb_160366_010 0.2572839857 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
18 Hb_000510_380 0.2588872015 - - -
19 Hb_000482_130 0.2588910505 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
20 Hb_012543_020 0.2588944807 - - -

Gene co-expression network

sample Hb_141408_010 Hb_141408_010 Hb_000956_140 Hb_000956_140 Hb_141408_010--Hb_000956_140 Hb_137268_010 Hb_137268_010 Hb_141408_010--Hb_137268_010 Hb_000083_190 Hb_000083_190 Hb_141408_010--Hb_000083_190 Hb_052600_010 Hb_052600_010 Hb_141408_010--Hb_052600_010 Hb_001241_090 Hb_001241_090 Hb_141408_010--Hb_001241_090 Hb_140618_010 Hb_140618_010 Hb_141408_010--Hb_140618_010 Hb_000956_140--Hb_137268_010 Hb_000956_140--Hb_000083_190 Hb_000956_140--Hb_052600_010 Hb_000956_140--Hb_001241_090 Hb_000956_140--Hb_140618_010 Hb_005396_140 Hb_005396_140 Hb_000956_140--Hb_005396_140 Hb_137268_010--Hb_000083_190 Hb_137268_010--Hb_052600_010 Hb_137268_010--Hb_001241_090 Hb_137268_010--Hb_140618_010 Hb_137268_010--Hb_005396_140 Hb_000083_190--Hb_052600_010 Hb_000083_190--Hb_001241_090 Hb_000083_190--Hb_140618_010 Hb_000083_190--Hb_005396_140 Hb_052600_010--Hb_001241_090 Hb_052600_010--Hb_140618_010 Hb_052600_010--Hb_005396_140 Hb_001105_080 Hb_001105_080 Hb_052600_010--Hb_001105_080 Hb_005834_030 Hb_005834_030 Hb_052600_010--Hb_005834_030 Hb_003675_010 Hb_003675_010 Hb_052600_010--Hb_003675_010 Hb_001241_090--Hb_140618_010 Hb_001241_090--Hb_005396_140 Hb_001241_090--Hb_001105_080 Hb_001241_090--Hb_005834_030 Hb_001241_090--Hb_003675_010 Hb_140618_010--Hb_005396_140 Hb_140618_010--Hb_001105_080 Hb_140618_010--Hb_005834_030 Hb_140618_010--Hb_003675_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.070424 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.18429 0.310075 0 0 0

CAGE analysis