Hb_137268_010

Information

Type -
Description -
Location Contig137268: 1271-2802
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_137268_010 0.0 - - -
2 Hb_000083_190 0.0322001785 - - low affinity nitrate transporter, partial [Triticum aestivum]
3 Hb_000956_140 0.033311082 - - -
4 Hb_052600_010 0.106856966 - - -
5 Hb_001241_090 0.1069764385 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
6 Hb_140618_010 0.1070085098 - - -
7 Hb_005396_140 0.1094916296 - - -
8 Hb_001105_080 0.1152311279 - - -
9 Hb_141408_010 0.1547623174 - - PREDICTED: uncharacterized protein LOC105631382 [Jatropha curcas]
10 Hb_001534_020 0.1611525737 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005834_030 0.1629454038 - - -
12 Hb_003675_010 0.1719131372 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
13 Hb_000270_820 0.1942138159 - - -
14 Hb_135585_010 0.2289369689 - - -
15 Hb_000510_380 0.244963303 - - -
16 Hb_000482_130 0.2449680725 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
17 Hb_012543_020 0.2449723231 - - -
18 Hb_185616_010 0.2449791412 - - Ran GTPase binding protein, putative [Ricinus communis]
19 Hb_061463_010 0.2450155016 - - Cucumisin precursor, putative [Ricinus communis]
20 Hb_002130_010 0.2450280637 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]

Gene co-expression network

sample Hb_137268_010 Hb_137268_010 Hb_000083_190 Hb_000083_190 Hb_137268_010--Hb_000083_190 Hb_000956_140 Hb_000956_140 Hb_137268_010--Hb_000956_140 Hb_052600_010 Hb_052600_010 Hb_137268_010--Hb_052600_010 Hb_001241_090 Hb_001241_090 Hb_137268_010--Hb_001241_090 Hb_140618_010 Hb_140618_010 Hb_137268_010--Hb_140618_010 Hb_005396_140 Hb_005396_140 Hb_137268_010--Hb_005396_140 Hb_000083_190--Hb_000956_140 Hb_000083_190--Hb_052600_010 Hb_000083_190--Hb_001241_090 Hb_000083_190--Hb_140618_010 Hb_000083_190--Hb_005396_140 Hb_000956_140--Hb_052600_010 Hb_000956_140--Hb_001241_090 Hb_000956_140--Hb_140618_010 Hb_000956_140--Hb_005396_140 Hb_052600_010--Hb_001241_090 Hb_052600_010--Hb_140618_010 Hb_052600_010--Hb_005396_140 Hb_001105_080 Hb_001105_080 Hb_052600_010--Hb_001105_080 Hb_005834_030 Hb_005834_030 Hb_052600_010--Hb_005834_030 Hb_003675_010 Hb_003675_010 Hb_052600_010--Hb_003675_010 Hb_001241_090--Hb_140618_010 Hb_001241_090--Hb_005396_140 Hb_001241_090--Hb_001105_080 Hb_001241_090--Hb_005834_030 Hb_001241_090--Hb_003675_010 Hb_140618_010--Hb_005396_140 Hb_140618_010--Hb_001105_080 Hb_140618_010--Hb_005834_030 Hb_140618_010--Hb_003675_010 Hb_005396_140--Hb_001105_080 Hb_005396_140--Hb_005834_030 Hb_005396_140--Hb_003675_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.82602 0.821404 0 0 0

CAGE analysis