Hb_003675_010

Information

Type -
Description -
Location Contig3675: 27404-28400
Sequence    

Annotation

kegg
ID rcu:RCOM_0857550
description Flavonol 3-sulfotransferase, putative (EC:2.8.2.2)
nr
ID XP_002529671.1
description Flavonol 3-sulfotransferase, putative [Ricinus communis]
swissprot
ID P52838
description Flavonol sulfotransferase-like OS=Flaveria bidentis PE=2 SV=1
trembl
ID B9SUK2
description Sulfotransferase OS=Ricinus communis GN=RCOM_0857550 PE=3 SV=1
Gene Ontology
ID GO:0008146
description flavonol sulfotransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003675_010 0.0 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
2 Hb_005834_030 0.0317230401 - - -
3 Hb_000270_820 0.0401802755 - - -
4 Hb_001105_080 0.0627129577 - - -
5 Hb_005396_140 0.0677844806 - - -
6 Hb_140618_010 0.0700106097 - - -
7 Hb_001241_090 0.0700394741 - - PREDICTED: uncharacterized protein LOC105775709 [Gossypium raimondii]
8 Hb_052600_010 0.0701470242 - - -
9 Hb_000510_380 0.0832474879 - - -
10 Hb_000482_130 0.0832520141 - - hypothetical protein POPTR_0011s01952g [Populus trichocarpa]
11 Hb_012543_020 0.083256048 - - -
12 Hb_185616_010 0.0832625185 - - Ran GTPase binding protein, putative [Ricinus communis]
13 Hb_061463_010 0.0832970267 - - Cucumisin precursor, putative [Ricinus communis]
14 Hb_002130_010 0.0833089495 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
15 Hb_000098_160 0.083368608 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003052_160 0.083368608 - - -
17 Hb_000413_310 0.0833803753 - - -
18 Hb_007393_010 0.0834711653 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
19 Hb_000914_160 0.0834887053 - - PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Glycine max]
20 Hb_006053_010 0.0835000922 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_003675_010 Hb_003675_010 Hb_005834_030 Hb_005834_030 Hb_003675_010--Hb_005834_030 Hb_000270_820 Hb_000270_820 Hb_003675_010--Hb_000270_820 Hb_001105_080 Hb_001105_080 Hb_003675_010--Hb_001105_080 Hb_005396_140 Hb_005396_140 Hb_003675_010--Hb_005396_140 Hb_140618_010 Hb_140618_010 Hb_003675_010--Hb_140618_010 Hb_001241_090 Hb_001241_090 Hb_003675_010--Hb_001241_090 Hb_005834_030--Hb_000270_820 Hb_005834_030--Hb_001105_080 Hb_005834_030--Hb_005396_140 Hb_005834_030--Hb_140618_010 Hb_005834_030--Hb_001241_090 Hb_000510_380 Hb_000510_380 Hb_000270_820--Hb_000510_380 Hb_000482_130 Hb_000482_130 Hb_000270_820--Hb_000482_130 Hb_012543_020 Hb_012543_020 Hb_000270_820--Hb_012543_020 Hb_185616_010 Hb_185616_010 Hb_000270_820--Hb_185616_010 Hb_001105_080--Hb_005396_140 Hb_001105_080--Hb_140618_010 Hb_001105_080--Hb_001241_090 Hb_052600_010 Hb_052600_010 Hb_001105_080--Hb_052600_010 Hb_005396_140--Hb_140618_010 Hb_005396_140--Hb_001241_090 Hb_005396_140--Hb_052600_010 Hb_140618_010--Hb_001241_090 Hb_140618_010--Hb_052600_010 Hb_001241_090--Hb_052600_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.135097 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
88.9578 48.1182 0 0 0.13027

CAGE analysis