Hb_000376_160

Information

Type -
Description -
Location Contig376: 326046-337596
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000376_160 0.0 - - -
2 Hb_007904_090 0.0976092927 - - PREDICTED: uncharacterized protein LOC100261196 [Vitis vinifera]
3 Hb_011431_010 0.1144360367 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
4 Hb_000438_170 0.1957886779 - - -
5 Hb_008078_030 0.2013076837 - - -
6 Hb_127008_010 0.2084312253 - - PREDICTED: uncharacterized protein LOC105629501 [Jatropha curcas]
7 Hb_002685_180 0.2106006148 transcription factor TF Family: LOB LOB domain-containing protein, putative [Ricinus communis]
8 Hb_000123_230 0.2200129416 - - conserved hypothetical protein [Ricinus communis]
9 Hb_068804_150 0.2248763377 - - conserved hypothetical protein [Ricinus communis]
10 Hb_003371_180 0.231116438 - - -
11 Hb_006816_220 0.2344074684 - - PREDICTED: zinc finger matrin-type protein 2 [Jatropha curcas]
12 Hb_005545_030 0.2356391312 - - PREDICTED: uncharacterized protein LOC105645697 [Jatropha curcas]
13 Hb_000710_010 0.2357820842 - - PREDICTED: uncharacterized protein LOC105630356 [Jatropha curcas]
14 Hb_181288_010 0.2368217866 - - rac-GTP binding protein, putative [Ricinus communis]
15 Hb_028347_010 0.2401257821 - - -
16 Hb_000788_130 0.2413790117 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein At4g27190-like [Jatropha curcas]
17 Hb_003206_120 0.2417109776 - - PREDICTED: glutamate decarboxylase 5-like [Jatropha curcas]
18 Hb_001951_140 0.2417996299 - - PREDICTED: uncharacterized protein LOC105649757 isoform X1 [Jatropha curcas]
19 Hb_003185_080 0.2426788482 rubber biosynthesis Gene Name: 1-deoxy-D-xylulose-5-phosphate synthase 1-deoxyxylulose-5-phosphate synthase, putative [Ricinus communis]
20 Hb_027760_010 0.2427621841 - - PREDICTED: uncharacterized protein LOC105630460 [Jatropha curcas]

Gene co-expression network

sample Hb_000376_160 Hb_000376_160 Hb_007904_090 Hb_007904_090 Hb_000376_160--Hb_007904_090 Hb_011431_010 Hb_011431_010 Hb_000376_160--Hb_011431_010 Hb_000438_170 Hb_000438_170 Hb_000376_160--Hb_000438_170 Hb_008078_030 Hb_008078_030 Hb_000376_160--Hb_008078_030 Hb_127008_010 Hb_127008_010 Hb_000376_160--Hb_127008_010 Hb_002685_180 Hb_002685_180 Hb_000376_160--Hb_002685_180 Hb_007904_090--Hb_011431_010 Hb_068804_150 Hb_068804_150 Hb_007904_090--Hb_068804_150 Hb_007904_090--Hb_002685_180 Hb_000175_040 Hb_000175_040 Hb_007904_090--Hb_000175_040 Hb_007904_090--Hb_008078_030 Hb_011431_010--Hb_000438_170 Hb_011431_010--Hb_008078_030 Hb_000710_010 Hb_000710_010 Hb_011431_010--Hb_000710_010 Hb_018599_010 Hb_018599_010 Hb_011431_010--Hb_018599_010 Hb_000462_140 Hb_000462_140 Hb_000438_170--Hb_000462_140 Hb_000789_090 Hb_000789_090 Hb_000438_170--Hb_000789_090 Hb_000109_090 Hb_000109_090 Hb_000438_170--Hb_000109_090 Hb_002284_090 Hb_002284_090 Hb_000438_170--Hb_002284_090 Hb_000438_170--Hb_000710_010 Hb_028347_010 Hb_028347_010 Hb_000438_170--Hb_028347_010 Hb_011161_070 Hb_011161_070 Hb_008078_030--Hb_011161_070 Hb_003029_080 Hb_003029_080 Hb_008078_030--Hb_003029_080 Hb_142522_010 Hb_142522_010 Hb_008078_030--Hb_142522_010 Hb_001811_040 Hb_001811_040 Hb_008078_030--Hb_001811_040 Hb_145761_010 Hb_145761_010 Hb_008078_030--Hb_145761_010 Hb_000221_100 Hb_000221_100 Hb_008078_030--Hb_000221_100 Hb_001504_050 Hb_001504_050 Hb_127008_010--Hb_001504_050 Hb_000144_080 Hb_000144_080 Hb_127008_010--Hb_000144_080 Hb_009486_150 Hb_009486_150 Hb_127008_010--Hb_009486_150 Hb_027760_010 Hb_027760_010 Hb_127008_010--Hb_027760_010 Hb_001377_400 Hb_001377_400 Hb_127008_010--Hb_001377_400 Hb_003371_180 Hb_003371_180 Hb_127008_010--Hb_003371_180 Hb_000453_210 Hb_000453_210 Hb_002685_180--Hb_000453_210 Hb_001495_060 Hb_001495_060 Hb_002685_180--Hb_001495_060 Hb_011242_030 Hb_011242_030 Hb_002685_180--Hb_011242_030 Hb_019033_010 Hb_019033_010 Hb_002685_180--Hb_019033_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.147056 0.0397865 0.0414913 0.0241937 0.0950152 0.051051
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.198978 0.215264 0 0.0155849 0.0824914

CAGE analysis