Hb_005066_080

Information

Type -
Description -
Location Contig5066: 67269-68438
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa025081mg
description hypothetical protein
nr
ID XP_007214265.1
description hypothetical protein PRUPE_ppa025081mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5WP28
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025081mg PE=4 SV=1
Gene Ontology
ID GO:0008762
description reticuline oxidase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005066_080 0.0 - - hypothetical protein PRUPE_ppa025081mg [Prunus persica]
2 Hb_001195_360 0.2030703692 - - PREDICTED: random slug protein 5 [Jatropha curcas]
3 Hb_008760_010 0.2149411671 - - berberine bridge enzyme [Hevea brasiliensis]
4 Hb_000538_180 0.2294876648 - - PREDICTED: probable polyamine oxidase 4 [Jatropha curcas]
5 Hb_000856_150 0.233922266 - - PREDICTED: pentatricopeptide repeat-containing protein At1g18900 [Jatropha curcas]
6 Hb_000130_110 0.2340975425 - - PREDICTED: TPR repeat-containing thioredoxin TTL1 [Jatropha curcas]
7 Hb_000215_080 0.2367744867 - - PREDICTED: uncharacterized protein LOC105637840 isoform X1 [Jatropha curcas]
8 Hb_006153_080 0.2388831043 - - flavin-containing monooxygenase-related family protein [Populus trichocarpa]
9 Hb_002205_130 0.239775821 - - hypothetical protein B456_008G176100 [Gossypium raimondii]
10 Hb_005542_060 0.244484595 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
11 Hb_012799_100 0.2492438305 - - PREDICTED: pentatricopeptide repeat-containing protein At3g29230-like [Jatropha curcas]
12 Hb_009005_050 0.2542998332 - - neutral/alkaline invertase 3 [Hevea brasiliensis]
13 Hb_001287_010 0.2544210072 - - PREDICTED: arginine decarboxylase [Jatropha curcas]
14 Hb_003777_050 0.2545143249 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105629120 [Jatropha curcas]
15 Hb_001511_070 0.2547210537 transcription factor TF Family: G2-like hypothetical protein POPTR_0010s19310g [Populus trichocarpa]
16 Hb_000239_020 0.2556464098 - - PREDICTED: F-box/kelch-repeat protein At5g43190 [Jatropha curcas]
17 Hb_001946_410 0.2561699554 transcription factor TF Family: C3H conserved hypothetical protein [Ricinus communis]
18 Hb_002043_050 0.2583620474 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Jatropha curcas]
19 Hb_000140_360 0.2586486693 - - PREDICTED: uncharacterized protein LOC105642906 [Jatropha curcas]
20 Hb_027393_030 0.2598099198 - - PREDICTED: uncharacterized protein At5g39865 [Jatropha curcas]

Gene co-expression network

sample Hb_005066_080 Hb_005066_080 Hb_001195_360 Hb_001195_360 Hb_005066_080--Hb_001195_360 Hb_008760_010 Hb_008760_010 Hb_005066_080--Hb_008760_010 Hb_000538_180 Hb_000538_180 Hb_005066_080--Hb_000538_180 Hb_000856_150 Hb_000856_150 Hb_005066_080--Hb_000856_150 Hb_000130_110 Hb_000130_110 Hb_005066_080--Hb_000130_110 Hb_000215_080 Hb_000215_080 Hb_005066_080--Hb_000215_080 Hb_001195_360--Hb_000130_110 Hb_003994_190 Hb_003994_190 Hb_001195_360--Hb_003994_190 Hb_002043_050 Hb_002043_050 Hb_001195_360--Hb_002043_050 Hb_002205_130 Hb_002205_130 Hb_001195_360--Hb_002205_130 Hb_009005_050 Hb_009005_050 Hb_001195_360--Hb_009005_050 Hb_012799_100 Hb_012799_100 Hb_001195_360--Hb_012799_100 Hb_008760_010--Hb_000130_110 Hb_006153_080 Hb_006153_080 Hb_008760_010--Hb_006153_080 Hb_008760_010--Hb_001195_360 Hb_008760_010--Hb_000856_150 Hb_000239_020 Hb_000239_020 Hb_008760_010--Hb_000239_020 Hb_002783_110 Hb_002783_110 Hb_008760_010--Hb_002783_110 Hb_012053_060 Hb_012053_060 Hb_000538_180--Hb_012053_060 Hb_117807_010 Hb_117807_010 Hb_000538_180--Hb_117807_010 Hb_000538_180--Hb_000130_110 Hb_000140_360 Hb_000140_360 Hb_000538_180--Hb_000140_360 Hb_000538_180--Hb_008760_010 Hb_000538_180--Hb_009005_050 Hb_008725_170 Hb_008725_170 Hb_000856_150--Hb_008725_170 Hb_000020_120 Hb_000020_120 Hb_000856_150--Hb_000020_120 Hb_001511_070 Hb_001511_070 Hb_000856_150--Hb_001511_070 Hb_000856_150--Hb_002205_130 Hb_000116_430 Hb_000116_430 Hb_000856_150--Hb_000116_430 Hb_000076_020 Hb_000076_020 Hb_000856_150--Hb_000076_020 Hb_000130_110--Hb_003994_190 Hb_000340_310 Hb_000340_310 Hb_000130_110--Hb_000340_310 Hb_000111_450 Hb_000111_450 Hb_000130_110--Hb_000111_450 Hb_005928_100 Hb_005928_100 Hb_000130_110--Hb_005928_100 Hb_002239_060 Hb_002239_060 Hb_000130_110--Hb_002239_060 Hb_031862_130 Hb_031862_130 Hb_000215_080--Hb_031862_130 Hb_008695_140 Hb_008695_140 Hb_000215_080--Hb_008695_140 Hb_001946_410 Hb_001946_410 Hb_000215_080--Hb_001946_410 Hb_005285_020 Hb_005285_020 Hb_000215_080--Hb_005285_020 Hb_005542_060 Hb_005542_060 Hb_000215_080--Hb_005542_060 Hb_000069_170 Hb_000069_170 Hb_000215_080--Hb_000069_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.356172 0.397036 0.952065 0.0898285 0.0302808 0.114334
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.148793 0.818883 2.31133 0.569727 0.466066

CAGE analysis