Hb_002701_030

Information

Type -
Description -
Location Contig2701: 20088-23256
Sequence    

Annotation

kegg
ID rcu:RCOM_0791080
description hypothetical protein
nr
ID XP_012088109.1
description PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
swissprot
ID Q8W486
description Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1
trembl
ID A0A067JNF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25624 PE=4 SV=1
Gene Ontology
ID GO:0016757
description o-fucosyltransferase family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28304: 21789-23748
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002701_030 0.0 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
2 Hb_000017_250 0.0863431445 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
3 Hb_005648_020 0.0911918351 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Jatropha curcas]
4 Hb_003849_170 0.0933744242 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
5 Hb_002600_120 0.0973967507 - - hypothetical protein JCGZ_25652 [Jatropha curcas]
6 Hb_004531_160 0.098129279 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
7 Hb_000997_080 0.1056863766 - - PREDICTED: protein WVD2-like 1 isoform X1 [Jatropha curcas]
8 Hb_000984_130 0.1058289311 - - tubulin [Ornithogalum longebracteatum]
9 Hb_003893_180 0.1098872778 - - PREDICTED: uncharacterized protein LOC105648771 [Jatropha curcas]
10 Hb_003607_090 0.1103144436 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
11 Hb_006788_110 0.1106063218 - - PREDICTED: protein LONGIFOLIA 1 [Jatropha curcas]
12 Hb_000419_140 0.1120453519 - - Aquaporin PIP2.1, putative [Ricinus communis]
13 Hb_002616_020 0.1187723473 - - PREDICTED: peroxidase 3 [Jatropha curcas]
14 Hb_003090_220 0.1190232053 - - PREDICTED: copper transporter 4 [Jatropha curcas]
15 Hb_003376_140 0.1196725204 - - PREDICTED: L-type lectin-domain containing receptor kinase VIII.1 [Jatropha curcas]
16 Hb_025787_020 0.1204219264 - - PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Jatropha curcas]
17 Hb_170077_020 0.1206121519 - - PREDICTED: probable serine incorporator [Jatropha curcas]
18 Hb_000076_280 0.1207850482 - - PREDICTED: pectinesterase-like [Populus euphratica]
19 Hb_033312_070 0.1220723318 - - hypothetical protein POPTR_0017s02960g [Populus trichocarpa]
20 Hb_001769_070 0.1223545122 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002701_030 Hb_002701_030 Hb_000017_250 Hb_000017_250 Hb_002701_030--Hb_000017_250 Hb_005648_020 Hb_005648_020 Hb_002701_030--Hb_005648_020 Hb_003849_170 Hb_003849_170 Hb_002701_030--Hb_003849_170 Hb_002600_120 Hb_002600_120 Hb_002701_030--Hb_002600_120 Hb_004531_160 Hb_004531_160 Hb_002701_030--Hb_004531_160 Hb_000997_080 Hb_000997_080 Hb_002701_030--Hb_000997_080 Hb_004705_060 Hb_004705_060 Hb_000017_250--Hb_004705_060 Hb_085829_010 Hb_085829_010 Hb_000017_250--Hb_085829_010 Hb_000853_250 Hb_000853_250 Hb_000017_250--Hb_000853_250 Hb_000162_190 Hb_000162_190 Hb_000017_250--Hb_000162_190 Hb_025787_020 Hb_025787_020 Hb_000017_250--Hb_025787_020 Hb_003466_010 Hb_003466_010 Hb_005648_020--Hb_003466_010 Hb_003607_080 Hb_003607_080 Hb_005648_020--Hb_003607_080 Hb_009736_020 Hb_009736_020 Hb_005648_020--Hb_009736_020 Hb_005648_020--Hb_003849_170 Hb_000093_010 Hb_000093_010 Hb_005648_020--Hb_000093_010 Hb_170077_020 Hb_170077_020 Hb_005648_020--Hb_170077_020 Hb_001257_140 Hb_001257_140 Hb_003849_170--Hb_001257_140 Hb_003849_170--Hb_170077_020 Hb_005144_150 Hb_005144_150 Hb_003849_170--Hb_005144_150 Hb_002616_020 Hb_002616_020 Hb_003849_170--Hb_002616_020 Hb_000352_360 Hb_000352_360 Hb_003849_170--Hb_000352_360 Hb_002600_120--Hb_004531_160 Hb_010142_060 Hb_010142_060 Hb_002600_120--Hb_010142_060 Hb_002600_120--Hb_003849_170 Hb_002600_120--Hb_000093_010 Hb_002600_120--Hb_005648_020 Hb_004531_160--Hb_010142_060 Hb_003376_140 Hb_003376_140 Hb_004531_160--Hb_003376_140 Hb_001079_050 Hb_001079_050 Hb_004531_160--Hb_001079_050 Hb_003607_090 Hb_003607_090 Hb_004531_160--Hb_003607_090 Hb_004531_160--Hb_005648_020 Hb_006002_050 Hb_006002_050 Hb_000997_080--Hb_006002_050 Hb_000984_130 Hb_000984_130 Hb_000997_080--Hb_000984_130 Hb_000003_610 Hb_000003_610 Hb_000997_080--Hb_000003_610 Hb_000011_280 Hb_000011_280 Hb_000997_080--Hb_000011_280 Hb_006788_110 Hb_006788_110 Hb_000997_080--Hb_006788_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0323399 0.363674 1.90108 7.11933 0.0201853 0.0512875
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0245126 0.0385733 0 0.913773 1.50467

CAGE analysis