Hb_002602_020

Information

Type -
Description -
Location Contig2602: 69096-72528
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002602_020 0.0 - - -
2 Hb_007276_020 0.1781514642 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
3 Hb_002304_020 0.2063155857 - - -
4 Hb_000982_110 0.2104455843 - - PREDICTED: chaperonin CPN60-2, mitochondrial-like [Jatropha curcas]
5 Hb_000062_140 0.2180093779 transcription factor TF Family: GRAS hypothetical protein JCGZ_17897 [Jatropha curcas]
6 Hb_003663_060 0.2194514392 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g43820 [Jatropha curcas]
7 Hb_002188_120 0.2225705235 - - PREDICTED: thymocyte nuclear protein 1 [Pyrus x bretschneideri]
8 Hb_003206_020 0.2292161575 - - PREDICTED: putative vacuolar protein sorting-associated protein 13A isoform X2 [Vitis vinifera]
9 Hb_008489_020 0.2300541072 - - PREDICTED: uncharacterized protein LOC105644663 [Jatropha curcas]
10 Hb_153533_010 0.2331204068 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform X3 [Jatropha curcas]
11 Hb_001951_180 0.2346246549 - - PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2 [Jatropha curcas]
12 Hb_006054_050 0.2367358213 - - PREDICTED: uncharacterized protein LOC105649250, partial [Jatropha curcas]
13 Hb_007922_020 0.2399513614 - - PREDICTED: uncharacterized protein LOC105646505 [Jatropha curcas]
14 Hb_005470_020 0.2427588404 - - PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Jatropha curcas]
15 Hb_005488_060 0.2432835114 - - cytochrome P450, putative [Ricinus communis]
16 Hb_011316_090 0.2447446165 - - OSJNBa0004L19.22 [Oryza sativa Japonica Group]
17 Hb_006117_040 0.2472026927 - - PREDICTED: seed biotin-containing protein SBP65 [Jatropha curcas]
18 Hb_003786_020 0.2482939653 - - PREDICTED: BTB/POZ domain-containing protein At3g50780 [Jatropha curcas]
19 Hb_020665_010 0.2492356893 - - PREDICTED: uncharacterized protein LOC103438977 isoform X2 [Malus domestica]
20 Hb_182831_010 0.2503737094 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]

Gene co-expression network

sample Hb_002602_020 Hb_002602_020 Hb_007276_020 Hb_007276_020 Hb_002602_020--Hb_007276_020 Hb_002304_020 Hb_002304_020 Hb_002602_020--Hb_002304_020 Hb_000982_110 Hb_000982_110 Hb_002602_020--Hb_000982_110 Hb_000062_140 Hb_000062_140 Hb_002602_020--Hb_000062_140 Hb_003663_060 Hb_003663_060 Hb_002602_020--Hb_003663_060 Hb_002188_120 Hb_002188_120 Hb_002602_020--Hb_002188_120 Hb_012146_030 Hb_012146_030 Hb_007276_020--Hb_012146_030 Hb_015026_080 Hb_015026_080 Hb_007276_020--Hb_015026_080 Hb_182831_010 Hb_182831_010 Hb_007276_020--Hb_182831_010 Hb_006054_050 Hb_006054_050 Hb_007276_020--Hb_006054_050 Hb_000702_080 Hb_000702_080 Hb_007276_020--Hb_000702_080 Hb_011316_090 Hb_011316_090 Hb_002304_020--Hb_011316_090 Hb_006373_040 Hb_006373_040 Hb_002304_020--Hb_006373_040 Hb_002304_020--Hb_002188_120 Hb_001369_750 Hb_001369_750 Hb_002304_020--Hb_001369_750 Hb_001080_090 Hb_001080_090 Hb_002304_020--Hb_001080_090 Hb_000281_090 Hb_000281_090 Hb_002304_020--Hb_000281_090 Hb_002067_020 Hb_002067_020 Hb_000982_110--Hb_002067_020 Hb_010642_030 Hb_010642_030 Hb_000982_110--Hb_010642_030 Hb_153533_010 Hb_153533_010 Hb_000982_110--Hb_153533_010 Hb_008489_020 Hb_008489_020 Hb_000982_110--Hb_008489_020 Hb_003405_050 Hb_003405_050 Hb_000982_110--Hb_003405_050 Hb_005488_060 Hb_005488_060 Hb_000982_110--Hb_005488_060 Hb_000062_140--Hb_003663_060 Hb_000062_140--Hb_153533_010 Hb_001439_060 Hb_001439_060 Hb_000062_140--Hb_001439_060 Hb_011021_020 Hb_011021_020 Hb_000062_140--Hb_011021_020 Hb_000861_020 Hb_000861_020 Hb_000062_140--Hb_000861_020 Hb_000193_270 Hb_000193_270 Hb_000062_140--Hb_000193_270 Hb_002681_070 Hb_002681_070 Hb_003663_060--Hb_002681_070 Hb_006915_070 Hb_006915_070 Hb_003663_060--Hb_006915_070 Hb_003663_060--Hb_000861_020 Hb_003663_060--Hb_153533_010 Hb_000631_080 Hb_000631_080 Hb_003663_060--Hb_000631_080 Hb_004994_380 Hb_004994_380 Hb_003663_060--Hb_004994_380 Hb_000111_420 Hb_000111_420 Hb_002188_120--Hb_000111_420 Hb_007922_020 Hb_007922_020 Hb_002188_120--Hb_007922_020 Hb_001546_060 Hb_001546_060 Hb_002188_120--Hb_001546_060 Hb_002188_120--Hb_000631_080 Hb_002188_120--Hb_001369_750 Hb_009658_020 Hb_009658_020 Hb_002188_120--Hb_009658_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.176985 0.0981247 0 0.0626906 0.1927 0.406461
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.223897 0.176081 0.0805793 0.053216 0.626604

CAGE analysis