Hb_000631_080

Information

Type transcription factor
Description TF Family: C2H2
Location Contig631: 77967-81019
Sequence    

Annotation

kegg
ID pmum:103338583
description dnaJ homolog subfamily C member 21
nr
ID XP_012080375.1
description PREDICTED: dnaJ homolog subfamily C member 21 [Jatropha curcas]
swissprot
ID Q6PGY5
description DnaJ homolog subfamily C member 21 OS=Danio rerio GN=dnajc21 PE=2 SV=1
trembl
ID A0A067K8K8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11719 PE=4 SV=1
Gene Ontology
ID GO:0003676
description dnaj homolog subfamily c member 21

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_51817: 78081-81004
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000631_080 0.0 transcription factor TF Family: C2H2 PREDICTED: dnaJ homolog subfamily C member 21 [Jatropha curcas]
2 Hb_000574_390 0.0655477776 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
3 Hb_086639_040 0.0760727276 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
4 Hb_002685_210 0.080461288 - - PREDICTED: BTB/POZ and MATH domain-containing protein 4 isoform X1 [Jatropha curcas]
5 Hb_000861_020 0.0882740069 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105631286 [Jatropha curcas]
6 Hb_015941_020 0.0972380594 - - -
7 Hb_004225_050 0.0988758222 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
8 Hb_022693_060 0.0989037842 - - -
9 Hb_000707_050 0.0992041988 - - PREDICTED: uncharacterized protein LOC105646684 isoform X2 [Jatropha curcas]
10 Hb_011242_040 0.100327995 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 1 isoform X1 [Jatropha curcas]
11 Hb_001675_180 0.1014812083 - - PREDICTED: golgin candidate 5 [Jatropha curcas]
12 Hb_015198_020 0.101665107 - - conserved hypothetical protein [Ricinus communis]
13 Hb_006649_050 0.1019691925 - - PREDICTED: zinc finger CCCH domain-containing protein 41 [Jatropha curcas]
14 Hb_001671_010 0.1033709602 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
15 Hb_001007_060 0.1034124311 - - Transcriptional corepressor SEUSS [Glycine soja]
16 Hb_005496_130 0.1035887552 - - PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Jatropha curcas]
17 Hb_012799_030 0.1043938285 - - PREDICTED: pentatricopeptide repeat-containing protein At1g55630-like [Jatropha curcas]
18 Hb_002725_120 0.1048547947 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Jatropha curcas]
19 Hb_000883_060 0.1056067718 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Jatropha curcas]
20 Hb_001019_190 0.1069684201 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_000631_080 Hb_000631_080 Hb_000574_390 Hb_000574_390 Hb_000631_080--Hb_000574_390 Hb_086639_040 Hb_086639_040 Hb_000631_080--Hb_086639_040 Hb_002685_210 Hb_002685_210 Hb_000631_080--Hb_002685_210 Hb_000861_020 Hb_000861_020 Hb_000631_080--Hb_000861_020 Hb_015941_020 Hb_015941_020 Hb_000631_080--Hb_015941_020 Hb_004225_050 Hb_004225_050 Hb_000631_080--Hb_004225_050 Hb_013405_030 Hb_013405_030 Hb_000574_390--Hb_013405_030 Hb_015198_020 Hb_015198_020 Hb_000574_390--Hb_015198_020 Hb_000574_390--Hb_086639_040 Hb_011242_040 Hb_011242_040 Hb_000574_390--Hb_011242_040 Hb_000707_050 Hb_000707_050 Hb_000574_390--Hb_000707_050 Hb_086639_040--Hb_000707_050 Hb_005496_130 Hb_005496_130 Hb_086639_040--Hb_005496_130 Hb_003688_150 Hb_003688_150 Hb_086639_040--Hb_003688_150 Hb_103118_010 Hb_103118_010 Hb_086639_040--Hb_103118_010 Hb_000172_290 Hb_000172_290 Hb_002685_210--Hb_000172_290 Hb_029510_050 Hb_029510_050 Hb_002685_210--Hb_029510_050 Hb_029879_070 Hb_029879_070 Hb_002685_210--Hb_029879_070 Hb_005490_030 Hb_005490_030 Hb_002685_210--Hb_005490_030 Hb_000254_090 Hb_000254_090 Hb_002685_210--Hb_000254_090 Hb_000861_020--Hb_103118_010 Hb_105123_010 Hb_105123_010 Hb_000861_020--Hb_105123_010 Hb_000861_020--Hb_086639_040 Hb_000061_210 Hb_000061_210 Hb_000861_020--Hb_000061_210 Hb_002154_100 Hb_002154_100 Hb_000861_020--Hb_002154_100 Hb_001671_010 Hb_001671_010 Hb_015941_020--Hb_001671_010 Hb_001049_110 Hb_001049_110 Hb_015941_020--Hb_001049_110 Hb_010883_040 Hb_010883_040 Hb_015941_020--Hb_010883_040 Hb_005686_090 Hb_005686_090 Hb_015941_020--Hb_005686_090 Hb_018133_090 Hb_018133_090 Hb_015941_020--Hb_018133_090 Hb_000883_060 Hb_000883_060 Hb_015941_020--Hb_000883_060 Hb_028912_050 Hb_028912_050 Hb_004225_050--Hb_028912_050 Hb_188063_020 Hb_188063_020 Hb_004225_050--Hb_188063_020 Hb_006649_050 Hb_006649_050 Hb_004225_050--Hb_006649_050 Hb_000028_480 Hb_000028_480 Hb_004225_050--Hb_000028_480 Hb_002849_100 Hb_002849_100 Hb_004225_050--Hb_002849_100 Hb_001004_060 Hb_001004_060 Hb_004225_050--Hb_001004_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
24.1597 13.489 6.7956 16.8058 24.588 32.7791
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
26.8739 25.4025 34.7973 16.3401 39.0159

CAGE analysis