Hb_010883_040

Information

Type -
Description -
Location Contig10883: 37011-42018
Sequence    

Annotation

kegg
ID pop:POPTR_0005s16140g
description POPTRDRAFT_1078405; putative phosphatidylinositol-4-phosphate 5-kinase mRNA family protein
nr
ID XP_012078161.1
description PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1 [Jatropha curcas]
swissprot
ID Q56YP2
description Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana GN=PIP5K1 PE=1 SV=1
trembl
ID A0A067K9J1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12044 PE=4 SV=1
Gene Ontology
ID GO:0016308
description phosphatidylinositol 4-phosphate 5-kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_02649: 37407-41831
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010883_040 0.0 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1 [Jatropha curcas]
2 Hb_001314_080 0.068568748 - - hypothetical protein POPTR_0018s14330g [Populus trichocarpa]
3 Hb_015941_020 0.0797535036 - - -
4 Hb_002496_020 0.089083621 - - DNA binding protein, putative [Ricinus communis]
5 Hb_000335_030 0.0927098459 - - PREDICTED: pentatricopeptide repeat-containing protein At2g17033 [Jatropha curcas]
6 Hb_001369_750 0.0988494654 - - PREDICTED: probable rRNA-processing protein EBP2 homolog [Jatropha curcas]
7 Hb_002276_020 0.1009924731 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH49 isoform X1 [Jatropha curcas]
8 Hb_004191_020 0.1026905374 - - PREDICTED: cysteine synthase [Jatropha curcas]
9 Hb_000665_130 0.1038831647 - - PREDICTED: uncharacterized protein LOC105637599 isoform X2 [Jatropha curcas]
10 Hb_001584_200 0.1084699244 - - PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA [Jatropha curcas]
11 Hb_000603_230 0.1108989986 - - copper-transporting atpase paa1, putative [Ricinus communis]
12 Hb_003153_010 0.1124363602 - - PREDICTED: diacylglycerol kinase 3-like [Jatropha curcas]
13 Hb_005405_020 0.1130874383 - - PREDICTED: petal death protein isoform X1 [Jatropha curcas]
14 Hb_009780_030 0.1155044519 transcription factor TF Family: GRAS hypothetical protein POPTR_0005s14540g [Populus trichocarpa]
15 Hb_000224_160 0.1160217893 - - PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial [Jatropha curcas]
16 Hb_001341_070 0.1181363349 - - PREDICTED: uncharacterized protein LOC105628138 isoform X1 [Jatropha curcas]
17 Hb_000556_090 0.1183252092 - - PREDICTED: uncharacterized protein LOC105643091 isoform X1 [Jatropha curcas]
18 Hb_000023_260 0.1194189075 - - PREDICTED: monogalactosyldiacylglycerol synthase, chloroplastic [Jatropha curcas]
19 Hb_001366_180 0.1196419907 - - PREDICTED: translocase of chloroplast 33, chloroplastic-like [Jatropha curcas]
20 Hb_015934_120 0.1202773295 - - PREDICTED: callose synthase 7 [Vitis vinifera]

Gene co-expression network

sample Hb_010883_040 Hb_010883_040 Hb_001314_080 Hb_001314_080 Hb_010883_040--Hb_001314_080 Hb_015941_020 Hb_015941_020 Hb_010883_040--Hb_015941_020 Hb_002496_020 Hb_002496_020 Hb_010883_040--Hb_002496_020 Hb_000335_030 Hb_000335_030 Hb_010883_040--Hb_000335_030 Hb_001369_750 Hb_001369_750 Hb_010883_040--Hb_001369_750 Hb_002276_020 Hb_002276_020 Hb_010883_040--Hb_002276_020 Hb_000023_260 Hb_000023_260 Hb_001314_080--Hb_000023_260 Hb_015934_120 Hb_015934_120 Hb_001314_080--Hb_015934_120 Hb_001504_030 Hb_001504_030 Hb_001314_080--Hb_001504_030 Hb_000212_230 Hb_000212_230 Hb_001314_080--Hb_000212_230 Hb_000665_130 Hb_000665_130 Hb_001314_080--Hb_000665_130 Hb_001671_010 Hb_001671_010 Hb_015941_020--Hb_001671_010 Hb_001049_110 Hb_001049_110 Hb_015941_020--Hb_001049_110 Hb_005686_090 Hb_005686_090 Hb_015941_020--Hb_005686_090 Hb_018133_090 Hb_018133_090 Hb_015941_020--Hb_018133_090 Hb_000883_060 Hb_000883_060 Hb_015941_020--Hb_000883_060 Hb_004191_020 Hb_004191_020 Hb_002496_020--Hb_004191_020 Hb_000479_250 Hb_000479_250 Hb_002496_020--Hb_000479_250 Hb_004531_140 Hb_004531_140 Hb_002496_020--Hb_004531_140 Hb_002496_020--Hb_001369_750 Hb_005405_020 Hb_005405_020 Hb_002496_020--Hb_005405_020 Hb_001584_200 Hb_001584_200 Hb_002496_020--Hb_001584_200 Hb_000335_030--Hb_004191_020 Hb_001341_070 Hb_001341_070 Hb_000335_030--Hb_001341_070 Hb_029510_050 Hb_029510_050 Hb_000335_030--Hb_029510_050 Hb_006478_020 Hb_006478_020 Hb_000335_030--Hb_006478_020 Hb_000676_250 Hb_000676_250 Hb_000335_030--Hb_000676_250 Hb_001369_750--Hb_000479_250 Hb_000261_060 Hb_000261_060 Hb_001369_750--Hb_000261_060 Hb_001369_750--Hb_002276_020 Hb_001366_180 Hb_001366_180 Hb_001369_750--Hb_001366_180 Hb_006274_030 Hb_006274_030 Hb_001369_750--Hb_006274_030 Hb_002276_020--Hb_000665_130 Hb_011316_090 Hb_011316_090 Hb_002276_020--Hb_011316_090 Hb_001951_180 Hb_001951_180 Hb_002276_020--Hb_001951_180 Hb_002276_020--Hb_000261_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.72252 5.56648 7.3527 9.14938 7.07233 7.93217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
13.5799 8.20848 9.8969 3.6336 18.0384

CAGE analysis