Hb_000665_130

Information

Type -
Description -
Location Contig665: 146195-155569
Sequence    

Annotation

kegg
ID pop:POPTR_0006s27450g
description hypothetical protein
nr
ID XP_012076494.1
description PREDICTED: uncharacterized protein LOC105637599 isoform X2 [Jatropha curcas]
swissprot
ID Q84JR9
description TPR repeat-containing thioredoxin TTL4 OS=Arabidopsis thaliana GN=TTL4 PE=2 SV=1
trembl
ID U5G8Z2
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s27450g PE=4 SV=1
Gene Ontology
ID GO:0005509
description heat shock protein 70 -interacting

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000665_130 0.0 - - PREDICTED: uncharacterized protein LOC105637599 isoform X2 [Jatropha curcas]
2 Hb_002276_020 0.0667295748 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH49 isoform X1 [Jatropha curcas]
3 Hb_000186_050 0.0728809041 - - PREDICTED: uncharacterized protein LOC105649281 [Jatropha curcas]
4 Hb_001369_750 0.0867921852 - - PREDICTED: probable rRNA-processing protein EBP2 homolog [Jatropha curcas]
5 Hb_011316_090 0.0886213336 - - OSJNBa0004L19.22 [Oryza sativa Japonica Group]
6 Hb_005736_020 0.0914463351 - - hypothetical protein POPTR_0005s20940g [Populus trichocarpa]
7 Hb_007508_060 0.0934383039 - - PREDICTED: uncharacterized protein LOC105640628 [Jatropha curcas]
8 Hb_000261_060 0.0939861014 - - PREDICTED: pre-mRNA-splicing factor 38B-like [Jatropha curcas]
9 Hb_001314_080 0.0944872503 - - hypothetical protein POPTR_0018s14330g [Populus trichocarpa]
10 Hb_007763_070 0.0944872728 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Jatropha curcas]
11 Hb_000720_050 0.0954105526 - - PREDICTED: uncharacterized protein LOC105645857 isoform X1 [Jatropha curcas]
12 Hb_001999_210 0.0979481197 - - PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Eucalyptus grandis]
13 Hb_004899_260 0.1016930693 - - PREDICTED: uncharacterized protein LOC105638006 [Jatropha curcas]
14 Hb_000193_330 0.103416981 - - PREDICTED: formin-like protein 20 [Jatropha curcas]
15 Hb_010883_040 0.1038831647 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1 [Jatropha curcas]
16 Hb_006775_130 0.1046343753 - - PREDICTED: bidirectional sugar transporter SWEET2a-like [Jatropha curcas]
17 Hb_001080_090 0.1058428574 - - PREDICTED: BTB/POZ domain-containing protein At2g30600 isoform X1 [Jatropha curcas]
18 Hb_005686_090 0.1062695223 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 2 isoform X1 [Jatropha curcas]
19 Hb_001951_220 0.1068998278 - - PREDICTED: CTD small phosphatase-like protein 2 isoform X5 [Jatropha curcas]
20 Hb_000465_280 0.1072877668 - - PREDICTED: pentatricopeptide repeat-containing protein At5g47360 [Jatropha curcas]

Gene co-expression network

sample Hb_000665_130 Hb_000665_130 Hb_002276_020 Hb_002276_020 Hb_000665_130--Hb_002276_020 Hb_000186_050 Hb_000186_050 Hb_000665_130--Hb_000186_050 Hb_001369_750 Hb_001369_750 Hb_000665_130--Hb_001369_750 Hb_011316_090 Hb_011316_090 Hb_000665_130--Hb_011316_090 Hb_005736_020 Hb_005736_020 Hb_000665_130--Hb_005736_020 Hb_007508_060 Hb_007508_060 Hb_000665_130--Hb_007508_060 Hb_002276_020--Hb_011316_090 Hb_002276_020--Hb_001369_750 Hb_001951_180 Hb_001951_180 Hb_002276_020--Hb_001951_180 Hb_000261_060 Hb_000261_060 Hb_002276_020--Hb_000261_060 Hb_010883_040 Hb_010883_040 Hb_002276_020--Hb_010883_040 Hb_001999_210 Hb_001999_210 Hb_000186_050--Hb_001999_210 Hb_001951_220 Hb_001951_220 Hb_000186_050--Hb_001951_220 Hb_000504_180 Hb_000504_180 Hb_000186_050--Hb_000504_180 Hb_002768_060 Hb_002768_060 Hb_000186_050--Hb_002768_060 Hb_000465_280 Hb_000465_280 Hb_000186_050--Hb_000465_280 Hb_000479_250 Hb_000479_250 Hb_001369_750--Hb_000479_250 Hb_001369_750--Hb_000261_060 Hb_001366_180 Hb_001366_180 Hb_001369_750--Hb_001366_180 Hb_006274_030 Hb_006274_030 Hb_001369_750--Hb_006274_030 Hb_002496_020 Hb_002496_020 Hb_001369_750--Hb_002496_020 Hb_011316_090--Hb_001951_180 Hb_011316_090--Hb_000261_060 Hb_011316_090--Hb_001369_750 Hb_000281_090 Hb_000281_090 Hb_011316_090--Hb_000281_090 Hb_005686_090 Hb_005686_090 Hb_005736_020--Hb_005686_090 Hb_001157_240 Hb_001157_240 Hb_005736_020--Hb_001157_240 Hb_001999_290 Hb_001999_290 Hb_005736_020--Hb_001999_290 Hb_001004_060 Hb_001004_060 Hb_005736_020--Hb_001004_060 Hb_001008_120 Hb_001008_120 Hb_005736_020--Hb_001008_120 Hb_000204_120 Hb_000204_120 Hb_005736_020--Hb_000204_120 Hb_000913_020 Hb_000913_020 Hb_007508_060--Hb_000913_020 Hb_009780_030 Hb_009780_030 Hb_007508_060--Hb_009780_030 Hb_001163_100 Hb_001163_100 Hb_007508_060--Hb_001163_100 Hb_000340_230 Hb_000340_230 Hb_007508_060--Hb_000340_230 Hb_007508_060--Hb_005686_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.24267 2.59167 1.31749 2.59681 1.89647 2.20963
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.07456 1.81465 2.46552 1.78641 5.60241

CAGE analysis