Hb_086639_040

Information

Type -
Description -
Location Contig86639: 23277-26805
Sequence    

Annotation

kegg
ID tcc:TCM_019017
description Phosphoinositide 4-kinase gamma 7, gamma 7,ubdk gamma 7,pi4k gamma 7 isoform 1
nr
ID XP_012088103.1
description PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
swissprot
ID Q9SI52
description Phosphatidylinositol 4-kinase gamma 7 OS=Arabidopsis thaliana GN=PI4KG7 PE=1 SV=2
trembl
ID A0A067JXQ7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25620 PE=4 SV=1
Gene Ontology
ID GO:0005515
description phosphatidylinositol 4-kinase gamma 7-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61008: 24543-24979 , PASA_asmbl_61009: 25418-26854 , PASA_asmbl_61010: 25418-26854
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_086639_040 0.0 - - PREDICTED: phosphatidylinositol 4-kinase gamma 7-like [Jatropha curcas]
2 Hb_000574_390 0.0703695779 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Jatropha curcas]
3 Hb_000707_050 0.0743888964 - - PREDICTED: uncharacterized protein LOC105646684 isoform X2 [Jatropha curcas]
4 Hb_000631_080 0.0760727276 transcription factor TF Family: C2H2 PREDICTED: dnaJ homolog subfamily C member 21 [Jatropha curcas]
5 Hb_005496_130 0.0850535907 - - PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X2 [Jatropha curcas]
6 Hb_003688_150 0.0865644561 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
7 Hb_103118_010 0.0889504694 - - PREDICTED: uncharacterized protein LOC105643231 [Jatropha curcas]
8 Hb_001671_010 0.0901485341 - - PREDICTED: U-box domain-containing protein 44-like [Jatropha curcas]
9 Hb_000861_020 0.0931960517 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105631286 [Jatropha curcas]
10 Hb_003142_020 0.093752255 - - PREDICTED: uncharacterized protein LOC105648334 [Jatropha curcas]
11 Hb_002725_120 0.0949204154 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05750, chloroplastic [Jatropha curcas]
12 Hb_009767_110 0.0956892312 - - -
13 Hb_002681_070 0.097108181 - - PREDICTED: uncharacterized protein LOC105633833 isoform X1 [Jatropha curcas]
14 Hb_008554_130 0.0973398257 transcription factor TF Family: MYB PREDICTED: uncharacterized protein LOC105634317 [Jatropha curcas]
15 Hb_044728_010 0.0987513739 - - -
16 Hb_155159_030 0.1002428785 - - PREDICTED: putative serine/threonine-protein kinase isoform X1 [Jatropha curcas]
17 Hb_001258_030 0.1015170104 - - tRNA-dihydrouridine synthase, putative [Ricinus communis]
18 Hb_004225_050 0.1020168776 transcription factor TF Family: MYB-related DNA binding protein, putative [Ricinus communis]
19 Hb_001019_190 0.1032681974 - - conserved hypothetical protein [Ricinus communis]
20 Hb_009382_010 0.1044231762 transcription factor TF Family: G2-like DNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_086639_040 Hb_086639_040 Hb_000574_390 Hb_000574_390 Hb_086639_040--Hb_000574_390 Hb_000707_050 Hb_000707_050 Hb_086639_040--Hb_000707_050 Hb_000631_080 Hb_000631_080 Hb_086639_040--Hb_000631_080 Hb_005496_130 Hb_005496_130 Hb_086639_040--Hb_005496_130 Hb_003688_150 Hb_003688_150 Hb_086639_040--Hb_003688_150 Hb_103118_010 Hb_103118_010 Hb_086639_040--Hb_103118_010 Hb_013405_030 Hb_013405_030 Hb_000574_390--Hb_013405_030 Hb_015198_020 Hb_015198_020 Hb_000574_390--Hb_015198_020 Hb_000574_390--Hb_000631_080 Hb_011242_040 Hb_011242_040 Hb_000574_390--Hb_011242_040 Hb_000574_390--Hb_000707_050 Hb_000739_310 Hb_000739_310 Hb_000707_050--Hb_000739_310 Hb_000832_020 Hb_000832_020 Hb_000707_050--Hb_000832_020 Hb_006711_100 Hb_006711_100 Hb_000707_050--Hb_006711_100 Hb_000707_050--Hb_013405_030 Hb_002685_210 Hb_002685_210 Hb_000631_080--Hb_002685_210 Hb_000861_020 Hb_000861_020 Hb_000631_080--Hb_000861_020 Hb_015941_020 Hb_015941_020 Hb_000631_080--Hb_015941_020 Hb_004225_050 Hb_004225_050 Hb_000631_080--Hb_004225_050 Hb_008554_130 Hb_008554_130 Hb_005496_130--Hb_008554_130 Hb_000165_250 Hb_000165_250 Hb_005496_130--Hb_000165_250 Hb_000291_050 Hb_000291_050 Hb_005496_130--Hb_000291_050 Hb_009767_110 Hb_009767_110 Hb_005496_130--Hb_009767_110 Hb_002725_120 Hb_002725_120 Hb_005496_130--Hb_002725_120 Hb_000029_050 Hb_000029_050 Hb_005496_130--Hb_000029_050 Hb_000783_020 Hb_000783_020 Hb_003688_150--Hb_000783_020 Hb_000120_460 Hb_000120_460 Hb_003688_150--Hb_000120_460 Hb_001619_070 Hb_001619_070 Hb_003688_150--Hb_001619_070 Hb_001318_270 Hb_001318_270 Hb_003688_150--Hb_001318_270 Hb_003688_150--Hb_103118_010 Hb_000061_210 Hb_000061_210 Hb_103118_010--Hb_000061_210 Hb_012675_050 Hb_012675_050 Hb_103118_010--Hb_012675_050 Hb_103118_010--Hb_000861_020 Hb_002408_020 Hb_002408_020 Hb_103118_010--Hb_002408_020 Hb_000046_050 Hb_000046_050 Hb_103118_010--Hb_000046_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.30132 2.35375 1.27562 1.51432 3.97003 4.07101
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.80803 4.63564 5.35219 3.29292 5.64589

CAGE analysis