Hb_002400_100

Information

Type -
Description -
Location Contig2400: 91071-97411
Sequence    

Annotation

kegg
ID cit:102625745
description putative UDP-sugar transporter DDB_G0278631-like
nr
ID XP_012076539.1
description PREDICTED: putative UDP-sugar transporter DDB_G0278631 isoform X1 [Jatropha curcas]
swissprot
ID Q54YK1
description Putative UDP-sugar transporter DDB_G0278631 OS=Dictyostelium discoideum GN=DDB_G0278631 PE=3 SV=2
trembl
ID A0A067KEZ9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07154 PE=4 SV=1
Gene Ontology
ID GO:0016021
description nucleotide sugar transporter family protein isoform 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002400_100 0.0 - - PREDICTED: putative UDP-sugar transporter DDB_G0278631 isoform X1 [Jatropha curcas]
2 Hb_000384_040 0.1770523648 - - PREDICTED: uncharacterized protein LOC105640093 [Jatropha curcas]
3 Hb_001116_020 0.181244624 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPS2-like [Eucalyptus grandis]
4 Hb_002233_090 0.1888836711 - - PREDICTED: bromodomain-containing protein 3 [Jatropha curcas]
5 Hb_051407_010 0.2045825262 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
6 Hb_000384_030 0.2069055522 - - PREDICTED: uncharacterized protein LOC101310565 isoform X1 [Fragaria vesca subsp. vesca]
7 Hb_010436_020 0.2185613766 - - Dicer-like protein 4 [Morus notabilis]
8 Hb_000103_360 0.2235667905 - - -
9 Hb_004342_030 0.2249164599 - - phosphofructokinase [Hevea brasiliensis]
10 Hb_001278_070 0.226428125 - - hypothetical protein glysoja_020139 [Glycine soja]
11 Hb_001902_070 0.2291036571 - - ATP binding protein, putative [Ricinus communis]
12 Hb_006026_040 0.2303967719 - - PREDICTED: 60S ribosomal protein L13a-4-like [Jatropha curcas]
13 Hb_049675_010 0.230820582 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
14 Hb_007904_220 0.2332200996 - - PREDICTED: protein SDA1 homolog isoform X1 [Jatropha curcas]
15 Hb_079738_010 0.2338872956 - - hypothetical protein CISIN_1g036582mg, partial [Citrus sinensis]
16 Hb_161072_040 0.2357719727 - - PREDICTED: replication factor C subunit 2 isoform X1 [Jatropha curcas]
17 Hb_000424_240 0.2362320267 - - PREDICTED: 3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2 [Jatropha curcas]
18 Hb_005205_020 0.2362437612 - - PREDICTED: protein FAM135B-like isoform X2 [Jatropha curcas]
19 Hb_000136_040 0.2381909166 - - PREDICTED: protein RRP5 homolog [Jatropha curcas]
20 Hb_001102_150 0.2417235695 - - PREDICTED: ethanolamine-phosphate cytidylyltransferase-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_002400_100 Hb_002400_100 Hb_000384_040 Hb_000384_040 Hb_002400_100--Hb_000384_040 Hb_001116_020 Hb_001116_020 Hb_002400_100--Hb_001116_020 Hb_002233_090 Hb_002233_090 Hb_002400_100--Hb_002233_090 Hb_051407_010 Hb_051407_010 Hb_002400_100--Hb_051407_010 Hb_000384_030 Hb_000384_030 Hb_002400_100--Hb_000384_030 Hb_010436_020 Hb_010436_020 Hb_002400_100--Hb_010436_020 Hb_000384_040--Hb_002233_090 Hb_087340_010 Hb_087340_010 Hb_000384_040--Hb_087340_010 Hb_000025_310 Hb_000025_310 Hb_000384_040--Hb_000025_310 Hb_103494_010 Hb_103494_010 Hb_000384_040--Hb_103494_010 Hb_001678_020 Hb_001678_020 Hb_000384_040--Hb_001678_020 Hb_034083_010 Hb_034083_010 Hb_001116_020--Hb_034083_010 Hb_001102_110 Hb_001102_110 Hb_001116_020--Hb_001102_110 Hb_040996_010 Hb_040996_010 Hb_001116_020--Hb_040996_010 Hb_006026_040 Hb_006026_040 Hb_001116_020--Hb_006026_040 Hb_001116_020--Hb_002233_090 Hb_109168_010 Hb_109168_010 Hb_002233_090--Hb_109168_010 Hb_001959_050 Hb_001959_050 Hb_002233_090--Hb_001959_050 Hb_000395_140 Hb_000395_140 Hb_002233_090--Hb_000395_140 Hb_001040_170 Hb_001040_170 Hb_002233_090--Hb_001040_170 Hb_006091_030 Hb_006091_030 Hb_002233_090--Hb_006091_030 Hb_000926_120 Hb_000926_120 Hb_002233_090--Hb_000926_120 Hb_002805_070 Hb_002805_070 Hb_051407_010--Hb_002805_070 Hb_001484_120 Hb_001484_120 Hb_051407_010--Hb_001484_120 Hb_007904_220 Hb_007904_220 Hb_051407_010--Hb_007904_220 Hb_051407_010--Hb_109168_010 Hb_051407_010--Hb_010436_020 Hb_034299_040 Hb_034299_040 Hb_051407_010--Hb_034299_040 Hb_001247_200 Hb_001247_200 Hb_000384_030--Hb_001247_200 Hb_001278_070 Hb_001278_070 Hb_000384_030--Hb_001278_070 Hb_058643_010 Hb_058643_010 Hb_000384_030--Hb_058643_010 Hb_002217_150 Hb_002217_150 Hb_000384_030--Hb_002217_150 Hb_006816_170 Hb_006816_170 Hb_000384_030--Hb_006816_170 Hb_009898_020 Hb_009898_020 Hb_000384_030--Hb_009898_020 Hb_049675_010 Hb_049675_010 Hb_010436_020--Hb_049675_010 Hb_000122_130 Hb_000122_130 Hb_010436_020--Hb_000122_130 Hb_034271_030 Hb_034271_030 Hb_010436_020--Hb_034271_030 Hb_010436_030 Hb_010436_030 Hb_010436_020--Hb_010436_030 Hb_001019_060 Hb_001019_060 Hb_010436_020--Hb_001019_060 Hb_012490_040 Hb_012490_040 Hb_010436_020--Hb_012490_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.32653 0.159672 0.010861 0.257241 5.31048 6.58313
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.29655 1.25538 1.91226 4.09545 1.47385

CAGE analysis