Hb_000384_040

Information

Type -
Description -
Location Contig384: 51579-54289
Sequence    

Annotation

kegg
ID rcu:RCOM_1329260
description hypothetical protein
nr
ID XP_012079705.1
description PREDICTED: uncharacterized protein LOC105640093 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067K9A6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14828 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000384_040 0.0 - - PREDICTED: uncharacterized protein LOC105640093 [Jatropha curcas]
2 Hb_002233_090 0.1623348865 - - PREDICTED: bromodomain-containing protein 3 [Jatropha curcas]
3 Hb_002400_100 0.1770523648 - - PREDICTED: putative UDP-sugar transporter DDB_G0278631 isoform X1 [Jatropha curcas]
4 Hb_087340_010 0.2007126766 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000025_310 0.2060645987 - - conserved hypothetical protein [Ricinus communis]
6 Hb_103494_010 0.2083911103 - - -
7 Hb_001678_020 0.214701852 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
8 Hb_006816_170 0.2147954154 - - PREDICTED: pyrophosphate-energized vacuolar membrane proton pump 1-like [Jatropha curcas]
9 Hb_000103_360 0.216175192 - - -
10 Hb_000384_030 0.2185506712 - - PREDICTED: uncharacterized protein LOC101310565 isoform X1 [Fragaria vesca subsp. vesca]
11 Hb_079738_010 0.2188321683 - - hypothetical protein CISIN_1g036582mg, partial [Citrus sinensis]
12 Hb_004767_090 0.2217208946 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
13 Hb_001247_200 0.2236317658 - - PREDICTED: clathrin coat assembly protein AP180 [Jatropha curcas]
14 Hb_004567_100 0.2256043474 - - PREDICTED: uncharacterized protein LOC105644934 [Jatropha curcas]
15 Hb_000395_140 0.2290583243 - - Oligopeptide transporter, putative [Ricinus communis]
16 Hb_007416_370 0.230243398 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001196_050 0.2317617104 - - -
18 Hb_000827_080 0.2318695473 - - catalytic, putative [Ricinus communis]
19 Hb_109168_010 0.232338483 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
20 Hb_002506_100 0.2359066521 - - PREDICTED: uncharacterized protein LOC105641759 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000384_040 Hb_000384_040 Hb_002233_090 Hb_002233_090 Hb_000384_040--Hb_002233_090 Hb_002400_100 Hb_002400_100 Hb_000384_040--Hb_002400_100 Hb_087340_010 Hb_087340_010 Hb_000384_040--Hb_087340_010 Hb_000025_310 Hb_000025_310 Hb_000384_040--Hb_000025_310 Hb_103494_010 Hb_103494_010 Hb_000384_040--Hb_103494_010 Hb_001678_020 Hb_001678_020 Hb_000384_040--Hb_001678_020 Hb_109168_010 Hb_109168_010 Hb_002233_090--Hb_109168_010 Hb_001959_050 Hb_001959_050 Hb_002233_090--Hb_001959_050 Hb_000395_140 Hb_000395_140 Hb_002233_090--Hb_000395_140 Hb_001040_170 Hb_001040_170 Hb_002233_090--Hb_001040_170 Hb_006091_030 Hb_006091_030 Hb_002233_090--Hb_006091_030 Hb_000926_120 Hb_000926_120 Hb_002233_090--Hb_000926_120 Hb_001116_020 Hb_001116_020 Hb_002400_100--Hb_001116_020 Hb_002400_100--Hb_002233_090 Hb_051407_010 Hb_051407_010 Hb_002400_100--Hb_051407_010 Hb_000384_030 Hb_000384_030 Hb_002400_100--Hb_000384_030 Hb_010436_020 Hb_010436_020 Hb_002400_100--Hb_010436_020 Hb_058884_010 Hb_058884_010 Hb_087340_010--Hb_058884_010 Hb_087340_010--Hb_001678_020 Hb_007101_200 Hb_007101_200 Hb_087340_010--Hb_007101_200 Hb_023323_010 Hb_023323_010 Hb_087340_010--Hb_023323_010 Hb_087340_010--Hb_002233_090 Hb_188964_010 Hb_188964_010 Hb_000025_310--Hb_188964_010 Hb_001582_030 Hb_001582_030 Hb_000025_310--Hb_001582_030 Hb_007441_070 Hb_007441_070 Hb_000025_310--Hb_007441_070 Hb_000771_160 Hb_000771_160 Hb_000025_310--Hb_000771_160 Hb_003581_020 Hb_003581_020 Hb_000025_310--Hb_003581_020 Hb_019871_020 Hb_019871_020 Hb_000025_310--Hb_019871_020 Hb_006816_170 Hb_006816_170 Hb_103494_010--Hb_006816_170 Hb_000270_220 Hb_000270_220 Hb_103494_010--Hb_000270_220 Hb_001247_200 Hb_001247_200 Hb_103494_010--Hb_001247_200 Hb_103494_010--Hb_000384_030 Hb_004348_010 Hb_004348_010 Hb_103494_010--Hb_004348_010 Hb_000101_160 Hb_000101_160 Hb_001678_020--Hb_000101_160 Hb_010620_010 Hb_010620_010 Hb_001678_020--Hb_010620_010 Hb_000103_360 Hb_000103_360 Hb_001678_020--Hb_000103_360 Hb_001678_020--Hb_023323_010 Hb_001678_020--Hb_002233_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.6387 0.636415 0.511179 0.680305 16.7463 11.2488
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.27507 1.83627 3.17219 5.18542 1.74016

CAGE analysis