Hb_007441_070

Information

Type -
Description -
Location Contig7441: 35876-37665
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa004494mg
description hypothetical protein
nr
ID XP_007219029.1
description hypothetical protein PRUPE_ppa004494mg [Prunus persica]
swissprot
ID -
description -
trembl
ID M5XFE1
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004494mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56593: 35583-37614 , PASA_asmbl_56594: 36329-37591
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007441_070 0.0 - - hypothetical protein PRUPE_ppa004494mg [Prunus persica]
2 Hb_000940_040 0.0652059657 - - PREDICTED: protein XAP5 CIRCADIAN TIMEKEEPER isoform X1 [Jatropha curcas]
3 Hb_011644_020 0.0962944267 - - PREDICTED: choline-phosphate cytidylyltransferase 2 [Vitis vinifera]
4 Hb_019871_020 0.0967222523 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
5 Hb_001582_030 0.096978121 - - PREDICTED: uncharacterized protein LOC105639462 [Jatropha curcas]
6 Hb_001357_190 0.0994986398 - - ribonuclease III, putative [Ricinus communis]
7 Hb_000152_890 0.0995272815 - - hypothetical protein JCGZ_26265 [Jatropha curcas]
8 Hb_000161_030 0.1009153545 transcription factor TF Family: TCP PREDICTED: transcription factor TCP8 [Jatropha curcas]
9 Hb_009421_030 0.1009394068 - - PREDICTED: uncharacterized protein LOC105639700 [Jatropha curcas]
10 Hb_000134_360 0.1042914248 - - PREDICTED: protein gar2 [Jatropha curcas]
11 Hb_008528_010 0.1054151434 - - PREDICTED: uncharacterized protein LOC105628498 [Jatropha curcas]
12 Hb_109168_010 0.1063273138 - - protein farnesyltransferase alpha subunit, putative [Ricinus communis]
13 Hb_000613_100 0.1065673748 - - PREDICTED: long chain acyl-CoA synthetase 8 [Jatropha curcas]
14 Hb_006029_010 0.1068222786 - - PREDICTED: putative disease resistance RPP13-like protein 1 [Populus euphratica]
15 Hb_007111_040 0.1083562861 - - PREDICTED: uncharacterized protein LOC105628142 isoform X1 [Jatropha curcas]
16 Hb_000849_100 0.1088578637 - - PREDICTED: uncharacterized protein LOC105644134 [Jatropha curcas]
17 Hb_004531_090 0.1103329459 - - PREDICTED: VHS domain-containing protein At3g16270 [Jatropha curcas]
18 Hb_001504_160 0.1104247239 - - PREDICTED: nuclear pore complex protein NUP96 [Jatropha curcas]
19 Hb_007534_040 0.1110622011 - - PREDICTED: uncharacterized protein LOC105635538 [Jatropha curcas]
20 Hb_000367_290 0.111582242 - - PREDICTED: uncharacterized protein LOC105640583 [Jatropha curcas]

Gene co-expression network

sample Hb_007441_070 Hb_007441_070 Hb_000940_040 Hb_000940_040 Hb_007441_070--Hb_000940_040 Hb_011644_020 Hb_011644_020 Hb_007441_070--Hb_011644_020 Hb_019871_020 Hb_019871_020 Hb_007441_070--Hb_019871_020 Hb_001582_030 Hb_001582_030 Hb_007441_070--Hb_001582_030 Hb_001357_190 Hb_001357_190 Hb_007441_070--Hb_001357_190 Hb_000152_890 Hb_000152_890 Hb_007441_070--Hb_000152_890 Hb_000940_040--Hb_019871_020 Hb_000940_040--Hb_011644_020 Hb_004656_060 Hb_004656_060 Hb_000940_040--Hb_004656_060 Hb_000270_140 Hb_000270_140 Hb_000940_040--Hb_000270_140 Hb_000608_340 Hb_000608_340 Hb_000940_040--Hb_000608_340 Hb_079326_010 Hb_079326_010 Hb_011644_020--Hb_079326_010 Hb_000684_180 Hb_000684_180 Hb_011644_020--Hb_000684_180 Hb_000540_140 Hb_000540_140 Hb_011644_020--Hb_000540_140 Hb_023226_060 Hb_023226_060 Hb_011644_020--Hb_023226_060 Hb_001195_030 Hb_001195_030 Hb_011644_020--Hb_001195_030 Hb_007111_040 Hb_007111_040 Hb_011644_020--Hb_007111_040 Hb_019871_020--Hb_000608_340 Hb_019871_020--Hb_001582_030 Hb_006173_020 Hb_006173_020 Hb_019871_020--Hb_006173_020 Hb_004531_090 Hb_004531_090 Hb_019871_020--Hb_004531_090 Hb_000185_090 Hb_000185_090 Hb_019871_020--Hb_000185_090 Hb_005000_270 Hb_005000_270 Hb_001582_030--Hb_005000_270 Hb_000212_280 Hb_000212_280 Hb_001582_030--Hb_000212_280 Hb_000134_360 Hb_000134_360 Hb_001582_030--Hb_000134_360 Hb_008528_010 Hb_008528_010 Hb_001582_030--Hb_008528_010 Hb_000732_020 Hb_000732_020 Hb_001582_030--Hb_000732_020 Hb_002405_020 Hb_002405_020 Hb_001357_190--Hb_002405_020 Hb_000395_140 Hb_000395_140 Hb_001357_190--Hb_000395_140 Hb_002675_190 Hb_002675_190 Hb_001357_190--Hb_002675_190 Hb_002149_040 Hb_002149_040 Hb_001357_190--Hb_002149_040 Hb_153547_010 Hb_153547_010 Hb_001357_190--Hb_153547_010 Hb_000367_290 Hb_000367_290 Hb_000152_890--Hb_000367_290 Hb_004032_350 Hb_004032_350 Hb_000152_890--Hb_004032_350 Hb_004724_360 Hb_004724_360 Hb_000152_890--Hb_004724_360 Hb_000001_180 Hb_000001_180 Hb_000152_890--Hb_000001_180 Hb_005314_010 Hb_005314_010 Hb_000152_890--Hb_005314_010 Hb_002133_030 Hb_002133_030 Hb_000152_890--Hb_002133_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.9491 4.13361 2.01759 3.30896 22.4608 17.796
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.3823 4.31796 6.36102 3.54562 1.94274

CAGE analysis